Sequence 1: | NP_571311.2 | Gene: | gata4 / 30483 | ZFINID: | ZDB-GENE-980526-476 | Length: | 352 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262366.1 | Gene: | grn / 40962 | FlyBaseID: | FBgn0001138 | Length: | 712 | Species: | Drosophila melanogaster |
Alignment Length: | 324 | Identity: | 133/324 - (41%) |
---|---|---|---|
Similarity: | 155/324 - (47%) | Gaps: | 79/324 - (24%) |
- Green bases have known domain annotations that are detailed below.
Zfish 8 AANHGAASYESGFLHNSTSPVYVTPTRVTPMIQALPYLQAPQQSSPASGHSGWAQPGVETTSYNS 72
Zfish 73 ---STGHHHS---PVSRFTFSTSPPLTSGRDTATYTSREHFGSRALSGSYHSGYPAYVSPNIGAS 131
Zfish 132 WTASHFDSSVLHSL---------------QTGGA-------AAARHPNLEFFD---------DLG 165
Zfish 166 EGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLVKPQRRL------SASRRVGLSC 224
Zfish 225 TNCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRKPKNISKTKPGSSEG 288 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
gata4 | NP_571311.2 | GATA-N | 1..158 | CDD:283099 | 35/177 (20%) |
ZnF_GATA | 165..210 | CDD:214648 | 39/44 (89%) | ||
ZnF_GATA | 169..219 | CDD:238123 | 43/55 (78%) | ||
ZnF_GATA | 221..268 | CDD:214648 | 38/46 (83%) | ||
ZnF_GATA | 223..274 | CDD:238123 | 42/50 (84%) | ||
grn | NP_001262366.1 | ZnF_GATA | 470..517 | CDD:214648 | 41/46 (89%) |
ZnF_GATA | 473..517 | CDD:238123 | 38/43 (88%) | ||
ZnF_GATA | 529..578 | CDD:214648 | 39/48 (81%) | ||
ZnF_GATA | 533..583 | CDD:238123 | 42/49 (86%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000130 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |