DRSC/TRiP Functional Genomics Resources

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Protein Alignment tcp1 and CCT1

DIOPT Version :9

Sequence 1:NP_571305.1 Gene:tcp1 / 30477 ZFINID:ZDB-GENE-990714-24 Length:556 Species:Danio rerio
Sequence 2:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster


Alignment Length:553 Identity:410/553 - (74%)
Similarity:477/553 - (86%) Gaps:1/553 - (0%)


- Green bases have known domain annotations that are detailed below.


Zfish     4 SPLSVLGQRTTGESVRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEV 68
            ||||:.|.|.:|.|||:||||||.||:||||||||||||||||||||||||:||||||||:||||
  Fly     6 SPLSIAGTRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEV 70

Zfish    69 EHPAAKVLCELAELQDKEVGDGTTSVVIIAAELLKSADELVKQKIHPTSIISGYRLACKEAVRYI 133
            ||||||||.|||:|||:|||||||||||:||||||:|||||||||||||||||||:|||||.:||
  Fly    71 EHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYI 135

Zfish   134 NENLTIGTDDLGRECLLNAAKTSMSSKIIGVDAEFFANMVVDAAVAVKFVDGKGVARYPINSVNV 198
            :|:||...|:|||:.|:|.|||||||||||.|||||:.||||||.:||..|.:|.|.|.|.::||
  Fly   136 SEHLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSIKAINV 200

Zfish   199 LKAHGRSQKESFLVNGYALNCTVGSQGMVKRVANAKIACLDFSLQKTKMKLGVQVVINDPEKLDQ 263
            |||||:|.:||.|:.|||||||:.||.|.|::.|||||||||||||||||:||||:||||:||:.
  Fly   201 LKAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIACLDFSLQKTKMKMGVQVLINDPDKLEA 265

Zfish   264 IRQRESDITKERVQKILASGANVVLTTGGIDDMCLKYFVDVGAMAVRRVLKKDLKRIAKATGATV 328
            ||.||.||||||:..||.:|.||||.:||:||:|:||||:.||||||||.|.|||.|||||||..
  Fly   266 IRARELDITKERINMILGTGVNVVLVSGGVDDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGAAF 330

Zfish   329 CSSLSNLEGEETFEPSMLGQAEEVVQERVCDDELILIKNTKARTSASIILRGANDFMCDEMERSL 393
            .:||:|::|||:|:.||:|:|.||.|||:|||||||||.||||.:|||||||.|||.|||||||:
  Fly   331 ITSLTNMDGEESFDASMVGEAAEVAQERICDDELILIKGTKARAAASIILRGPNDFYCDEMERSV 395

Zfish   394 HDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPKTLAVNAA 458
            ||||||||||||||.||.|||.|||||||||||:|||:.|||||||||||:|||||||||:||||
  Fly   396 HDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQLAIAEFAKSLLVIPKTLSVNAA 460

Zfish   459 QDSTDLVAKLRAFHNEAQVNPDRKNLKWIGLDLVNGKPRDNKQAGVYEPTMVKTKSLKFATEAAI 523
            :|:||||||||::||.:|..|:|.:|||.||||:.|..||||:|||.||.|.|.|||||||||||
  Fly   461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAI 525

Zfish   524 TILRIDDLIKLFPDQKEGGPSYQDAVQSGSLEG 556
            |||||||:|||.|:.| .|.||.||..:|.|:|
  Fly   526 TILRIDDMIKLNPEDK-SGKSYADACAAGELDG 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tcp1NP_571305.1 chap_CCT_alpha 6..541 CDD:274081 400/534 (75%)
TCP1_alpha 10..536 CDD:239451 396/525 (75%)
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 396/525 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574690
Domainoid 1 1.000 757 1.000 Domainoid score I86
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5656
Inparanoid 1 1.050 807 1.000 Inparanoid score I468
OMA 1 1.010 - - QHG60896
OrthoDB 1 1.010 - - D205390at33208
OrthoFinder 1 1.000 - - FOG0005251
OrthoInspector 1 1.000 - - oto40231
orthoMCL 1 0.900 - - OOG6_101890
Panther 1 1.100 - - LDO PTHR11353
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1484
SonicParanoid 1 1.000 - - X3773
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 1 1.500 - -
1515.440

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