DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment etv5b and pnt

DIOPT Version :9

Sequence 1:NP_001296138.1 Gene:etv5b / 30452 ZFINID:ZDB-GENE-991228-4 Length:526 Species:Danio rerio
Sequence 2:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster


Alignment Length:555 Identity:131/555 - (23%)
Similarity:195/555 - (35%) Gaps:211/555 - (38%)


- Green bases have known domain annotations that are detailed below.


Zfish    32 KRKFVDTELAQDTEELFQDLSQLQEIWIAEAQVPDDEQFVPDFQSDNLMFHGPPQTKIKREMSPS 96
            |.||:........:.|::.|..||:    :.:.|:::           :.||       .....:
  Fly   224 KEKFLAITPPFTGDILWEHLDILQK----DCEKPNED-----------IVHG-------NSFESA 266

Zfish    97 REFSPCGQEQRLSPYGEKCL---------------YNYSAFDRKPFTFNKPLTPPSTPASPFGSS 146
            ...|.||.:.:::.|..:..               |..||.:.....|::     :||.|..|.:
  Fly   267 TTASVCGSDHQVANYPNETHANSNNSSINSRLSMDYVTSAGNSDNKNFHR-----ATPHSHNGYN 326

Zfish   147 STATHPVQKRAMPPAQTQTQGAPLLPGPNHSSTSPHQRAQTPLHSQSPPFAVPCTPVNHPDASYS 211
            ::.||.....:.||.|.|:| .|.:.|...:|::.:       :|..||........|:..:|.:
  Fly   327 TSNTHDRINNSTPPQQQQSQ-QPTVNGSGSASSNNN-------NSMLPPAVQQSNNENNNTSSSN 383

Zfish   212 TDHRFHRQLSEPCLPFPQSDGRCQTPYPPQTRGHFPRHSRPPYQRQMSEPLVPMPPQGFKKEMVD 276
            |::..:..         .:.|                                    |.......
  Fly   384 TNNSSNNN---------NNSG------------------------------------GSNNSNAG 403

Zfish   277 PRYNEQGVQNMGPPRAPLFHQLSIKQEP-------RDFGFDSEVQNCH---SSFG---------- 321
            ...|.....|:....|....|..:|:||       ..:|..|..||..   ||:|          
  Fly   404 SNNNNNNNNNINFMAAAAIFQHHLKEEPGTQNGNIGGYGGGSNSQNDPTDLSSYGLPAHLAAYGG 468

Zfish   322 ------------------------------KSSNFYGGNGEG--------------------FG- 335
                                          :|....||||.|                    :| 
  Fly   469 GSGSGPTGGRSSGGGGDESDYHSTISAQDHQSQQSSGGNGSGGASGGSTGNSNGYLDSSSEFYGS 533

Zfish   336 -----------------YD-----------------GEAHLYYDDACVVP----DR-LEGKLKQE 361
                             ||                 |.||.:...|..:.    |: |.|....:
  Fly   534 YAGRNRFHDGYPPEFTPYDAQSFQSMGPQPTAMDQWGAAHAHQHPAAYMSTLGLDKGLLGGYTTQ 598

Zfish   362 GGVFRDGPPYQRRGSLQLWQFLVTLLDDPSNGHFITWTGRGLEFKLIEPEEVARRWGIQKNRPAM 426
            |||    |.:...|.:||||||:.||.|.:...||:|||.|.||||.:|:||||||||:||:|.|
  Fly   599 GGV----PCFTGSGPIQLWQFLLELLLDKTCQSFISWTGDGWEFKLTDPDEVARRWGIRKNKPKM 659

Zfish   427 NYDKLSRSLRYYYEKGIMQKVKVAGERYVYKFVCD 461
            ||:||||.|||||:|.|:.  |.||:||||:||||
  Fly   660 NYEKLSRGLRYYYDKNIIH--KTAGKRYVYRFVCD 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
etv5bNP_001296138.1 ETS_PEA3_N 1..375 CDD:282476 74/467 (16%)
Herpes_DNAp_acc <132..187 CDD:282746 14/54 (26%)
ETS 376..463 CDD:197710 56/86 (65%)
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879 7/29 (24%)
ETS 609..693 CDD:197710 56/86 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.