DRSC/TRiP Functional Genomics Resources

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Protein Alignment serpinh1b and Spn88Eb

DIOPT Version :10

Sequence 1:NP_571279.2 Gene:serpinh1b / 30449 ZFINID:ZDB-GENE-990415-93 Length:405 Species:Danio rerio
Sequence 2:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster


Alignment Length:439 Identity:93/439 - (21%)
Similarity:178/439 - (40%) Gaps:59/439 - (13%)


- Green bases have known domain annotations that are detailed below.


Zfish     1 MWVSSLIALCLL-AVAVSGEDK-KLS--THATSMADTSANLAFNLYHNVAKEKGLENILISPVVV 61
            |...||:.|.|| .|.::..|| :||  ...:.:.....:.:..|...:.:.....|:..||...
  Fly     1 MHTFSLVLLALLPVVTIAALDKPELSFLNEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPFST 65

Zfish    62 ASSLGMVAMGSKSSTASQVKSVLKAD-ALKDEHLHTGLSELLTEVSDPQTRNVTWKIS------- 118
            .::|.:....|...|..::...|... ||..:.:.  :|..|.:..|    ...|:.|       
  Fly    66 YNALLLAYFSSSEQTERELAQALNLGWALNKQQVL--VSYTLAQRQD----EFRWRQSPMELSSA 124

Zfish   119 NRLYGPSSVSFAEDF---VKNSKKHYNYEHSKINFRDKRSAINSINEWAAKTTDGKLPEITKDVK 180
            ||::...:::.:..|   :..:.|..::::      |..:.:..||:|.|..|..::.::....:
  Fly   125 NRIFVDRTINVSNKFNTLLYGATKELDFKN------DPETGLKEINDWIADKTHNQIRDMLSSEE 183

Zfish   181 NTDGAMIV--NAMFFKPHWDEKFHHKMVDNRGFLVTRSHTVSVPMMHRTGIY------------- 230
            .|...|:|  ||.:.|..|..:|..:....:.|.:.......|.|||:||.:             
  Fly   184 ITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQII 248

Zfish   231 -----GFYEDTENRFLIVSMPLAHKKSSMIFIMPYHVE-PLDRLENLLTRQQLDTWISKLEERAV 289
                 ..|:..|..   :|.|.:....|||.|:|...: .|:|:.:.|....:..|..:...:.:
  Fly   249 KLPYRTIYKSKETH---ISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQKI 310

Zfish   290 AISLPKVSMEVSHDLQKHLGELGLTEAVDKSK--ADLSNISGKKDLYLSNVFHASSLEWDTEGNP 352
            .:||||...|...:|...|..:|:.....::.  .||:  :....|.:.:..|.:.::.|..|:.
  Fly   311 ELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLT--ADPISLVIDDAQHLAKIKVDEVGST 373

Zfish   353 FDPS----IFGSEKMRNPKLFYADHPFIFLVKDNKTNSILFIGRLVRPK 397
            ...:    :..|.:..:|..|..:|||:||:.|.|.::|||.|....|:
  Fly   374 AAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSDPR 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
serpinh1bNP_571279.2 serpin 23..404 CDD:476815 84/415 (20%)
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 81/403 (20%)

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