Sequence 1: | XP_009293555.1 | Gene: | ncam1a / 30447 | ZFINID: | ZDB-GENE-990415-31 | Length: | 1010 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
Alignment Length: | 791 | Identity: | 177/791 - (22%) |
---|---|---|---|
Similarity: | 282/791 - (35%) | Gaps: | 180/791 - (22%) |
- Green bases have known domain annotations that are detailed below.
Zfish 16 YAAALQVEITPTQGEISVGESKFFLCEVVGDAKEIDWFAPNGEKLLPGRPDISISKTDESSSTLT 80
Zfish 81 IYNANVDHAGMYKCVAKS--GEKESQGTIIVKIFQKLTFQYAPSPQEFNEGDDADIICDVISS-P 142
Zfish 143 PPTIIWRYKKMRIQPETDVRLKVLSNNHLQIRGIKKTDEGDYTCEGRIMARGEIDLR---VIKVI 204
Zfish 205 VNVLP-SIRTRYTELNATADINQAVTLACHADGYPEPTVKWAR----GNTELESDEKYSLNEDGS 264
Zfish 265 ELTIKDVNKLDEGDYKCIARNKAGERSEEVTLNVFVQPKITFLENQTASELEEQITLTCEATGDP 329
Zfish 330 TPNIIWSFGRRVFTENEQASWTRPEKHKS---------LDGNVVVRSDARVSSLTLKYVQFTDAG 385
Zfish 386 -QYLCTARNSIGQDIQSMYL-----EVRYAP-KIQGPQAVFTWEGNPANITCEALAHPGASVLWF 443
Zfish 444 RDGQQLPSANTTNVKIYNTPTVSFLEVTPDSQNDFGSYNCTATNVIGTES-KEFILV-------- 499
Zfish 500 -------QADVPSAPSIERVEPYSSTAM-IEFEEPASSGGVPVLKYKAEWRIAGQD--WTDREYE 554
Zfish 555 LEDGLNLITIVGLKPETTYEVKISAINGKGEGESSAPESFKTQPVRLPFRMSPETPTSIPPTTAD 619
Zfish 620 IKGEPNPPKLEAKPQSTGNEMKV-----HFIKQDDGGSPIKHYLVRYRAKNRQD-------WKPE 672
Zfish 673 IRMPDASDYIVLRGLDWNTEYEVYVIAENQRGRSEPGTLSFRTLPEPTAIPETSSGLGTGAIVGI 737
Zfish 738 LIVVFILLLFG 748 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ncam1a | XP_009293555.1 | Ig | 20..112 | CDD:299845 | 16/93 (17%) |
I-set | 21..111 | CDD:254352 | 16/91 (18%) | ||
IG_like | 121..200 | CDD:214653 | 21/82 (26%) | ||
IGc2 | 128..189 | CDD:197706 | 18/61 (30%) | ||
Ig | 208..301 | CDD:299845 | 33/97 (34%) | ||
IG_like | 219..298 | CDD:214653 | 29/82 (35%) | ||
Ig | 300..406 | CDD:299845 | 27/120 (23%) | ||
IG_like | 308..406 | CDD:214653 | 25/112 (22%) | ||
ig | 413..498 | CDD:278476 | 22/85 (26%) | ||
IG_like | 415..498 | CDD:214653 | 21/83 (25%) | ||
fn3 | 505..589 | CDD:278470 | 18/86 (21%) | ||
FN3 | 624..715 | CDD:238020 | 16/102 (16%) | ||
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 17/96 (18%) |
I-set | 23..116 | CDD:254352 | 17/95 (18%) | ||
I-set | 122..211 | CDD:254352 | 22/92 (24%) | ||
Ig | 125..211 | CDD:299845 | 21/89 (24%) | ||
I-set | 215..302 | CDD:254352 | 32/93 (34%) | ||
Ig | 232..302 | CDD:299845 | 28/73 (38%) | ||
I-set | 306..401 | CDD:254352 | 26/111 (23%) | ||
Ig | 320..411 | CDD:299845 | 25/107 (23%) | ||
I-set | 412..492 | CDD:254352 | 23/83 (28%) | ||
IGc2 | 429..489 | CDD:197706 | 18/63 (29%) | ||
FN3 | 519..612 | CDD:238020 | 24/114 (21%) | ||
FN3 | 644..735 | CDD:238020 | 20/107 (19%) | ||
fn3 | 743..832 | CDD:278470 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR13817 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |