DRSC/TRiP Functional Genomics Resources

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Protein Alignment brd2a and tbrd-2

DIOPT Version :9

Sequence 1:NP_571275.2 Gene:brd2a / 30445 ZFINID:ZDB-GENE-990415-248 Length:836 Species:Danio rerio
Sequence 2:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster


Alignment Length:865 Identity:174/865 - (20%)
Similarity:296/865 - (34%) Gaps:283/865 - (32%)


- Green bases have known domain annotations that are detailed below.


Zfish    35 RIRKPSLLYEGFEGPALPHIAQSGPPQPAVRDPSRQGRMTNQLQFLQKALVKTLWRHHFAWPFHE 99
            :::.|:.:...|    :||             |...||.||:|.:.:|.|:....:..:|..|.|
  Fly    10 KLKLPNRVQPEF----IPH-------------PGMAGRYTNKLHYFKKHLLDEARKKKYALDFLE 57

Zfish   100 PVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMA 164
            |||...|.:|.||.:|.:|||:|||.||::||||:|.:|.:.||..:.:||:::|:..|.:....
  Fly    58 PVDTEALMVPTYYTVIHRPMDIGTIVKRVQNNYYKSVNEAIADFKQIISNCFLFNRSGDVVYRKG 122

Zfish   165 QSLEKAFLQKVAQMPEVEE----EIPAPVPRGKQSKPKKGQKLFSGGITTAHQVPAISSLSQLAY 225
            |.|||.|.:|:..||...|    ..|..|.|.:.:.|...|       |.......:..|..:  
  Fly   123 QMLEKFFHKKLRGMPSGPEVPCNRDPKAVGRPRTNAPSSAQ-------TERKCRELLKKLQSI-- 178

Zfish   226 SPPTPDTPDSVLSTPPQTLITKNFPPPPLHSTPALLGLPPTQPTAKKKGVKRKADTTTPTTTVMP 290
                         |.....:|:||                  .:.|...:::|.|... ..:|..
  Fly   179 -------------TNQTDAMTRNF------------------FSNKWDSLQKKVDRQY-FKSVNE 211

Zfish   291 LTLGVGG----------------MGMGMGMGMSMGMGMGMGLGGDSPLTLSNMGMDSKQSLS--- 336
            ..|.|.|                .........||        .|:|.|..:....|..:.|:   
  Fly   212 FCLHVDGCFRKYHEPAKILYERVFNQPAAWCTSM--------NGNSSLESALNAADLNELLAAAK 268

Zfish   337 LSLGMSLE-DKVPARRGGSGRPIKPPRKDLPDSQNQHQPVRRGKLSQQLRYCSTILKELLSKKHT 400
            |::...:: .::|    |||.|:  ..|.|.::                 :|.| |.::::|...
  Fly   269 LTVNSLMQCVQMP----GSGEPL--TAKSLVET-----------------FCDT-LNKMINKMEA 309

Zfish   401 AYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDALQ--FAADVRLMFSN----- 458
            ...                     ..|...|:.::||...:..|.:|  |...:.|:..|     
  Fly   310 GQR---------------------NSPNPSSSKRQKMSPEQETDLVQGEFKPAMELLSGNEIDNL 353

Zfish   459 -CYKYNPPDHDVVAMARRLQD----VFEFRFAKMPD----------EPLESLPPASLGG------ 502
             .......|.:.:..:.|:.|    ..:..|||:|.          :.:|.....:.|.      
  Fly   354 MAVSIESSDDEAIDASMRITDADRCATQKLFAKLPTNAMKEIIHMVQQIEGFSSENCGDLSFDVK 418

Zfish   503 GLGGDSSSSSSSSSSSSESDVSSESESESSPSSDSEEERAHRLAQLQEQVCTQLRAVHEQLAALS 567
            ||..|:.....|:.:.:....|.....:..||.....:||     ||.|:....|.:::      
  Fly   419 GLATDTMIMMKSAVTKATRAHSKLKLKDMQPSEKEGLQRA-----LQSQLVNITRMLNK------ 472

Zfish   568 STPIIKPKKKKEKKDKKKKKKPEKHKRSRSVIEDEVVMRPAKIPKLPKTPKSRSNSKAATSTQSK 632
                           .:::..|..:.|:::...:.||.:.|..|...|....::|..|.......
  Fly   473 ---------------NRRRCGPLINFRNKNNTANNVVRKRATAPLTAKLKPLQANVMAPQLGAGV 522

Zfish   633 KSSNKKSNKSKSSKKAQPTFFPPPLSHSGLTPHYDSEEEEETSPMSYDEKRQLSLDINRLPGEKL 697
            ..::..|:.|.....|     |..||..|.||                   ..:|.||       
  Fly   523 VETHNLSDTSDDDVSA-----PVKLSAIGGTP-------------------MRNLPIN------- 556

Zfish   698 GRVVHIIQSREPSLRDTNPEEIEIDFETLKPSTLRELERYVMMCLRKKPRKPFVAIKGSAGKSRE 762
                            :||.:                    |..:|..|:.|.|.          
  Fly   557 ----------------SNPLQ--------------------MQPIRSPPKLPHVV---------- 575

Zfish   763 ELALEKKRELERRLQDVSGQLNSVKKPQKTKAEKPSAVEPHAVASRLSASSSSSDS--------- 818
            ||.:......|..::..||:|:.    .::::...:.:.|.:.:|..|.|:|||.|         
  Fly   576 ELQMSSSSSSESEMKSKSGRLSR----SRSRSMSDTKLRPRSNSSASSRSNSSSSSGSNAGSSSG 636

Zfish   819 ----SSSSSSSSSSDTSESD 834
                |||||||||:::|||:
  Fly   637 SRSRSSSSSSSSSNNSSESN 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brd2aNP_571275.2 Bromo_Brdt_I_like 72..178 CDD:99929 43/105 (41%)
Bromo_Brdt_II_like 383..484 CDD:99930 16/112 (14%)
BET 676..738 CDD:293640 5/61 (8%)
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941 40/101 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 149 1.000 Inparanoid score I4352
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.910

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