Protein Alignment hoxc3a and Antp

DIOPT Version :9

• Sequence 1: NP_001128157.2
• Gene: hoxc3a / 30421
• ZFINID: ZDB-GENE-980526-532
• Length: 263
• Species: Danio rerio
• Sequence 2: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 243
• Identity: 73/243 - (30%)
• Similarity: 95/243 - (39%)
• Gaps: 85/243 - (34%)

Zfish    19 TCSLQLKHRVRKAIGG-----------------GHHVTTLFTL---VGKQLKTRENSSTWKRHAE 63
            :|.||      .|:||                 |||:....||   :|              |.:
  Fly   161 SCKLQ------AAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMG--------------HPQ 205

Zfish    64 ESSSENDKG------------NVWNFQNLSNV----QHPYSFSDDGN-----HSLDPANALEREK 107
            ......|.|            |:..:|..|.|    ..|......|.     |...|.......:
  Fly   206 AQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQ 270

Zfish   108 ACELSTSCLSTMKYPWMRETHAPTHFSSINAMESGDSKYSNGEAVVRNSSSKRARVAFTSSQLLE 172
            .....:|.:.:..|||||                  |::  |:...|    ||.|..:|..|.||
  Fly   271 NPNSQSSGMPSPLYPWMR------------------SQF--GKCQER----KRGRQTYTRYQTLE 311

Zfish   173 LEKEFHFSAYLCRNRRLEMAELLKLTDRQIKIWFQNRRMKYKKDHKEK 220
            |||||||:.||.|.||:|:|..|.||:|||||||||||||:||::|.|
  Fly   312 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hoxc3a	NP_001128157.2	Abdominal-A	123..246	CDD:332641	47/98 (48%)
		Homeobox	162..214	CDD:306543	35/51 (69%)
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	35/188 (19%)
		Homeobox	301..354	CDD:395001	35/52 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.810