DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzd7b and Corin

DIOPT Version :9

Sequence 1:NP_739569.1 Gene:fzd7b / 30412 ZFINID:ZDB-GENE-990415-229 Length:557 Species:Danio rerio
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:121 Identity:42/121 - (34%)
Similarity:61/121 - (50%) Gaps:2/121 - (1%)


- Green bases have known domain annotations that are detailed below.


Zfish    40 PEHGFCQPISIPLC--TDIQYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSQDLKFFLCSMY 102
            |..|.|.||.:..|  ..|.||.|:.||.:||..|.:...::..:..||.|:|.:.:..|||:::
  Fly   774 PAPGTCLPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLF 838

Zfish   103 APVCTVLEQAIPPCRTLCERARQGCEALMNKFGFQWPERLRCENFPVHGAGEICVG 158
            .|.|......:|||:|||....:.|....:.||...||.|.|:.|....:.|.|||
  Fly   839 VPKCGQSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDCVG 894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzd7bNP_739569.1 CRD_FZ1_like 43..161 CDD:143567 41/118 (35%)
Frizzled 228..545 CDD:279827
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 38/115 (33%)
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
SRCR 992..1086 CDD:278931
Tryp_SPc 1103..1343 CDD:214473
Tryp_SPc 1104..1346 CDD:238113
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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