DRSC/TRiP Functional Genomics Resources

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Protein Alignment hoxa10b and unpg

DIOPT Version :10

Sequence 1:NP_571230.2 Gene:hoxa10b / 30391 ZFINID:ZDB-GENE-990415-97 Length:347 Species:Danio rerio
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:218 Identity:63/218 - (28%)
Similarity:91/218 - (41%) Gaps:39/218 - (17%)


- Green bases have known domain annotations that are detailed below.


Zfish   142 DISYSRLTPNSCPSSNNNGCVPVPGYFRLSQTCTTSKGFTDNQT-------IPTHVVAQRSTRFD 199
            |:||.||    ....|.:....:..:.||.......:...|...       .||...|..|....
  Fly   171 DLSYRRL----AELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKS 231

Zfish   200 SSLSAI--AAEASRDE---------SDEPPTCAPCAPGRN-----KELRGSTGTASSPEPPDSPE 248
            .|.|.:  |.:...||         ||...|.:|    ||     .:.|....|.|..|.....|
  Fly   232 GSHSPMEPALDVGMDEDFECSGDSCSDISLTMSP----RNYNGEMDKSRNGAYTNSDSEDCSDDE 292

Zfish   249 KAVTVTKAG-----DSKSESTANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISR 308
            .|.:..:.|     ||:...:::  .:|| |::|..:|..|.||||:||....||:...|.:|:.
  Fly   293 GAQSRHEGGGMGGKDSQGNGSSS--NSKS-RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIAT 354

Zfish   309 SVHLTDRQVKIWFQNRRMKLKKM 331
            |:.|::.||||||||||.|.|::
  Fly   355 SLKLSEVQVKIWFQNRRAKWKRV 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hoxa10bNP_571230.2 Homeodomain 274..330 CDD:459649 27/55 (49%)
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 25/51 (49%)

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