DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment th and ple

DIOPT Version :9

Sequence 1:NP_571224.1 Gene:th / 30384 ZFINID:ZDB-GENE-990621-5 Length:489 Species:Danio rerio
Sequence 2:NP_001286955.1 Gene:ple / 38746 FlyBaseID:FBgn0005626 Length:579 Species:Drosophila melanogaster


Alignment Length:483 Identity:241/483 - (49%)
Similarity:332/483 - (68%) Gaps:32/483 - (6%)


- Green bases have known domain annotations that are detailed below.


Zfish    20 ELERSDSITSQKFVGRRQ------SLIEDARKEREAAAAA--AEAAGLSEQIVFEESDGKALISL 76
            |.|:|:| .||:..|.:|      .|.||......||:.:  ||||..|..:|....:|   || 
  Fly   111 EQEQSES-QSQEPEGNQQPTKNDYGLTEDEILLANAASESSDAEAAMQSAALVVRLKEG---IS- 170

Zfish    77 FFTLRCSKSPALSRTLKVFETFEAKIHHLETRPSRKPKDGLEDLEYYVQCEVHLSDVSTLVSSLK 141
                      :|.|.||..|||...:.|:|:|.||  .:|: |.:..::.::...::..|:.||:
  Fly   171 ----------SLGRILKAIETFHGTVQHVESRQSR--VEGV-DHDVLIKLDMTRGNLLQLIRSLR 222

Zfish   142 RSAE------DVKTTKEVKFHWFPRKIAELDKCHHLVTKYDPDLDQDHPGFTDPVYRKRRKMIGD 200
            :|..      .......||..|||:..:|||.|:||:|||:||||.:||||.|.|||:|||.|.:
  Fly   223 QSGSFSSMNLMADNNLNVKAPWFPKHASELDNCNHLMTKYEPDLDMNHPGFADKVYRQRRKEIAE 287

Zfish   201 IAFKYRHGEPIPRVDYTEEEIGTWREVYSTLRDLYTTHACSEHLEAFRLLEKHCGYSPDNIPQLE 265
            |||.|::|:|||.:||::.|:.|||.|:.|::||...|||:|:..||:.|:....:....:|||:
  Fly   288 IAFAYKYGDPIPFIDYSDVEVKTWRSVFKTVQDLAPKHACAEYRAAFQKLQDEQIFVETRLPQLQ 352

Zfish   266 DVSCFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCVHELLGHVPI 330
            ::|.||::.|||.|||.||||:|||||||||||:||.|||:||.:||.|:||||.:||||||:|:
  Fly   353 EMSDFLRKNTGFSLRPAAGLLTARDFLASLAFRIFQSTQYVRHVNSPYHTPEPDSIHELLGHMPL 417

Zfish   331 LSDRTFAQFSQSIGLASLGASDEDIEKLSTMYWFTVEFGLCKQGGVIKAYGAGLLSSYGELVHSL 395
            |:|.:||||||.|||||||||||:||||||:|||||||||||:.|.|||||||||||||||:|::
  Fly   418 LADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKEHGQIKAYGAGLLSSYGELLHAI 482

Zfish   396 SDEPERREFDPDIVAVQPYQDQTYQPVYFVSESFVDATEKLRTYVTRIKRPFSVRFDPYTDSIEV 460
            ||:.|.|.|:|...||||||||.|||:|:|:|||.||.:|.|.:|:.:.|||.|||:|:|:.:||
  Fly   483 SDKCEHRAFEPASTAVQPYQDQEYQPIYYVAESFEDAKDKFRRWVSTMSRPFEVRFNPHTERVEV 547

Zfish   461 LDNPLKIQKGLETIKDELKILTDALNVL 488
            ||:..|::..:..:..|:..||:|::.|
  Fly   548 LDSVDKLETLVHQMNTEILHLTNAISKL 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thNP_571224.1 Tyr_3_monoox 36..489 CDD:130336 234/467 (50%)
ACT 36..151 CDD:298841 33/128 (26%)
Biopterin_H 157..486 CDD:278766 198/328 (60%)
pleNP_001286955.1 Tyr_3_monoox 130..576 CDD:130336 233/463 (50%)
ACT 130..234 CDD:298841 32/120 (27%)
Biopterin_H 243..573 CDD:278766 198/329 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581373
Domainoid 1 1.000 432 1.000 Domainoid score I563
eggNOG 1 0.900 - - E1_COG3186
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H307
Inparanoid 1 1.050 452 1.000 Inparanoid score I1578
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D361696at33208
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 1 1.000 - - otm25545
orthoMCL 1 0.900 - - OOG6_108343
Panther 1 1.100 - - LDO PTHR11473
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4798
SonicParanoid 1 1.000 - - X3954
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.790

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