DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyp26a1 and Cyp9c1

DIOPT Version :9

Sequence 1:NP_571221.2 Gene:cyp26a1 / 30381 ZFINID:ZDB-GENE-990415-44 Length:492 Species:Danio rerio
Sequence 2:NP_523850.1 Gene:Cyp9c1 / 37941 FlyBaseID:FBgn0015040 Length:522 Species:Drosophila melanogaster


Alignment Length:519 Identity:115/519 - (22%)
Similarity:191/519 - (36%) Gaps:150/519 - (28%)


- Green bases have known domain annotations that are detailed below.


Zfish    51 LPFIGETLQLILQRRK---------FLRMKRQKYGCIYKTHLFGNPTVRVMGADNVRQILLGEHK 106
            :|.:|.....:|..::         .||:|:.|   :|......:|...:...:.:||:      
  Fly    39 IPLLGNIPWSVLMGKESYIKHSIDLHLRLKQHK---VYGVFNLRDPLYYLSDPELIRQV------ 94

Zfish   107 LVSVQWPASVRTILGSDTLSNVHGVQHKNKKKAIMRAFSRDALEHYIPVIQQEVKS-AIQEWLQK 170
                       .|...||.:        |.:|.|...|:..:      ||.:.:.| ..:.|.|.
  Fly    95 -----------GIKNFDTFT--------NHRKGITEGFNDTS------VISKSLLSLRDRRWKQM 134

Zfish   171 DSCVLVYPEMKKLMFRIAMRIL-------LGFEPEQIK--TDEQEL------------------- 207
            .|.:.  |....|..|....::       :.|...|:.  |.|.||                   
  Fly   135 RSTLT--PTFTSLKIRQMFELIHFCNVEAVDFVQRQLDAGTSELELKDFFTRYTNDVIATAAFGI 197

Zfish   208 -VEAFEEMIKNLFSLPIDVPFSGLYRGLRARNFI-HSKIEENIRKKIQDDDNEN--------EQK 262
             |.:|::.....||:...:.....:.||:...:| ..|:.:.:|..:.|.:|.:        ..|
  Fly   198 QVNSFKDPNNEFFSIGQRISEFTFWGGLKVMLYILMPKLMKALRVPVMDMNNVDYFKKLVFGAMK 262

Zfish   263 YK--------DALQLLIENSRRSDEPFSLQAMKEAATE-------------------LLF--GGH 298
            |:        |.:.||:|..|:      .:|.:|.:.|                   |||  .|.
  Fly   263 YRKEQSIVRPDMIHLLMEAQRQ------FKAEQEGSAESAAQQDKAEFNDDDLLAQCLLFFSAGF 321

Zfish   299 ETTASTATSLVMFLGLNTEVVQKVREEV-QEKVEMGMYTPGKGLSMELLDQLKYTGCVIKETLRI 362
            ||.|:..:.....|.:|.||.:|:..|: ..|.::|    .|.|..:.|..:||..||:.|:||.
  Fly   322 ETVATCLSFTSYELMMNPEVQEKLLAEILAVKEQLG----EKPLDYDTLMGMKYLNCVVSESLRK 382

Zfish   363 NPPVPGGFRVALKTFELNGYQIPKGWNVI---------YSICDTHDVADVFPNKDEFQPERFMSK 418
            .||.....|:....|:|..   .:|..|:         .::...|...|.||..::|:||||..:
  Fly   383 WPPAFIVDRMCGSDFQLKD---EEGEVVVNLREDDLVHINVGALHHDPDNFPEPEQFRPERFDEE 444

Zfish   419 GLEDGSRFNYIPFGGGSRMCVGKEFAKVLLK--IFLVELTQHCNWILSNGPPTMKTGPTVYPVD 480
            ...:..:|.|:|||.|.|.|:|...|.:.:|  ||.:.|..|..       ||.:|     |.|
  Fly   445 HKHEIRQFTYLPFGVGQRSCIGNRLALMEVKSLIFQLVLRYHLK-------PTDRT-----PAD 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cyp26a1NP_571221.2 p450 14..487 CDD:299894 115/519 (22%)
Cyp9c1NP_523850.1 p450 37..514 CDD:299894 115/519 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2429
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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