DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyp26a1 and Cyp6a23

DIOPT Version :9

Sequence 1:NP_571221.2 Gene:cyp26a1 / 30381 ZFINID:ZDB-GENE-990415-44 Length:492 Species:Danio rerio
Sequence 2:NP_611000.2 Gene:Cyp6a23 / 36661 FlyBaseID:FBgn0033978 Length:502 Species:Drosophila melanogaster


Alignment Length:509 Identity:100/509 - (19%)
Similarity:195/509 - (38%) Gaps:108/509 - (21%)


- Green bases have known domain annotations that are detailed below.


Zfish     5 TLMVTFLCTIVLPVLLFLAAVK--LWEMLMIRRVDPNCRSPLPPGTMGLPFIGETLQLILQRRKF 67
            :|::| |..:::.:|||:|..:  .|:.   |.:..:...|:.......|           :::.
  Fly     2 SLLLT-LIALLVSLLLFMARRRHGYWQR---RGIPHDVPHPIYGNMKDWP-----------KKRH 51

Zfish    68 LRMKRQKYGCIYKT--------HLFGNPTVRVMGADNVRQILLG-----EHKLV---SVQWPASV 116
            :.|..:.|...||.        :.|...:..:...:.|:::|:.     |::.:   .:..|.|.
  Fly    52 IAMIFRDYYTKYKRSVYPFAGFYFFFTRSAVITDLELVKRVLIKDFNHFENRGIFYNEIDDPLSA 116

Zfish   117 RTILGSDTLSNVHGVQHKNKKKAIMRAFSRDALEHYIPVIQQEVKSAIQEWLQK---------DS 172
                   ||.::.|.:.::.:..:...|:...:::..|:|   ||  :.|.::|         :.
  Fly   117 -------TLFSIEGQKWRHLRHKLTPTFTSGKMKNMFPII---VK--VGEEMEKIFSAKTTTGEG 169

Zfish   173 CVLVYPEMKKLMFRIAMRIL----LGFEPEQIKTDEQELVEAFEEMIKNLFSLPIDVPFSGLYRG 233
            .||   |:..|:.|....::    .|.....::....|.|...:..|       |:..:.||   
  Fly   170 QVL---EIVDLVARYTADVIGNCAFGLNCNSLQNPNAEFVTIGKRAI-------IERRYGGL--- 221

Zfish   234 LRARNFIHSKIEENIRKKIQDDD-------------------NENEQKYKDALQLLIENSRRSDE 279
            |....|...|:...:|.|:...|                   ||....:.|:|..:.|..:..:.
  Fly   222 LDFLIFGFPKLSRRLRLKLNVQDVEDFYTSIVRNTIDYRLRTNEKRHDFMDSLIEMYEKEQAGNT 286

Zfish   280 PFSLQAMKEAATELLF--GGHETTASTATSLVMFLGLNTEVVQKVREEVQEKVEMGMYTPGKGLS 342
            ...|...:..|...:|  .|.||:::|....:..|.|:.::..::|.|:...:.    ......:
  Fly   287 EDGLSFNEILAQAFIFFVAGFETSSTTMGFALYELALDQDIQDQLRAEINNVLS----KHNNEFT 347

Zfish   343 MELLDQLKYTGCVIKETLRINPPVPGGFRVALKTF--ELNGYQIPKGWNVIYSICDTHDVADVFP 405
            .|.:.::||...|:.||||..|.:....|:....|  |...|.|.||..|:......|...:::|
  Fly   348 YEGIKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGIHYDPEIYP 412

Zfish   406 NKDEFQPERFMSKGLEDGSRFNYIPFGGGSRMCVGKEFAKVLLKIFLVELTQHC 459
            ..::|:||||..:.:.......::|||.|.|.|:|..|.          |.|.|
  Fly   413 EPEKFKPERFTDEAIAARPSCTWLPFGEGPRNCIGLRFG----------LMQAC 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cyp26a1NP_571221.2 p450 14..487 CDD:299894 97/500 (19%)
Cyp6a23NP_611000.2 p450 36..495 CDD:278495 91/471 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2429
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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