DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cyp26a1 and Cyp4e2

DIOPT Version :9

Sequence 1:NP_571221.2 Gene:cyp26a1 / 30381 ZFINID:ZDB-GENE-990415-44 Length:492 Species:Danio rerio
Sequence 2:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster


Alignment Length:495 Identity:113/495 - (22%)
Similarity:192/495 - (38%) Gaps:89/495 - (17%)


- Green bases have known domain annotations that are detailed below.


Zfish    14 IVLPVLLFLAAVKLWEMLMIRRVDPNCRSPLPP--GTMGLPFIGETLQLILQRRKFLRMKRQKYG 76
            :.||:||    |...|:...||     |..|..  |..|||.:|                     
  Fly     9 LALPLLL----VAYLELSTFRR-----RRVLNKFNGPRGLPLMG--------------------- 43

Zfish    77 CIYKTHLFG-NP-----TV----RVMGADNVRQILLGEHKLVSVQWPASVRTILGSDTL---SNV 128
               ..|..| ||     ||    ...|.||. ...:|.:..|.|.....:..||.|.||   |::
  Fly    44 ---NAHQMGKNPSEILDTVFSWWHQYGKDNF-VFWIGTYSNVLVTSSKYLEFILSSQTLITKSDI 104

Zfish   129 HGVQH---------------KNKKKAIMRAFSRDALEHYIPVIQQEVKSAIQEW---LQKDSCVL 175
            :.:.|               ...:|.|..||..:.|:.:..|:.:.....|:..   ...|:...
  Fly   105 YQLTHPWLGLGLLTSTGSKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDNIFD 169

Zfish   176 VYPEMKKLMFRIAMRILLGFEPEQIKTDEQELVEAFEEMIKN--------------LFSLPIDVP 226
            ...:...|...:.....:|.....::.....:|:||::|..|              |:.|..|.|
  Fly   170 FQEQAHYLTLDVICDTAMGVSINAMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYP 234

Zfish   227 -FSGLYRGLR--ARNFIHSKIEENIRKKIQDDDNENEQKYKDALQLLIENSRRSDEPFSLQAMKE 288
             :|...:.|:  ....|..:||.:....:..:..:...:.|.|....:.:|.....|.:.:.:.|
  Fly   235 AYSRTLKTLQDFTNEIIAKRIEAHKSGAVSTNAGDEFTRKKMAFLDTLLSSTIDGRPLNSKELYE 299

Zfish   289 AATELLFGGHETTASTATSLVMFLGLNTEVVQKVREEVQEKVEMGMYTPGKGLSMELLDQLKYTG 353
            ..:..:|.||:||.|..:..|..|..:.:..:|:.:|.:|  .||....|:..:.:.:.|:||..
  Fly   300 EVSTFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQRE--VMGNSELGRDATFQEISQMKYLD 362

Zfish   354 CVIKETLRINPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADVFPNKDEFQPERFMSK 418
            ..|||..|:.|.||...|...|.:.::|..:|||..:...:........||.:..:|:||||   
  Fly   363 LFIKEAQRVYPSVPFIGRFTEKDYVIDGDLVPKGTTLNLGLVMLGYNEKVFKDPHKFRPERF--- 424

Zfish   419 GLEDGSRFNYIPFGGGSRMCVGKEFAKVLLKIFLVELTQH 458
            .||....|.|:||..|.|.|:|::||.:.:|..:.::.::
  Fly   425 ELEKPGPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRN 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cyp26a1NP_571221.2 p450 14..487 CDD:299894 113/495 (23%)
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 103/460 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.