DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyp26a1 and Cyp4s3

DIOPT Version :9

Sequence 1:NP_571221.2 Gene:cyp26a1 / 30381 ZFINID:ZDB-GENE-990415-44 Length:492 Species:Danio rerio
Sequence 2:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster


Alignment Length:537 Identity:122/537 - (22%)
Similarity:205/537 - (38%) Gaps:111/537 - (20%)


- Green bases have known domain annotations that are detailed below.


Zfish    11 LCTIVLPVLLFLAAV-----KLWEMLMIRRVDPNCRSPLPPGTMGLPFIGETLQLILQRRK---- 66
            :.|:.|...:..||.     |:...|.::|.     :...||    |.|||   ||...:|    
  Fly     1 MSTLALVAFVLWAAFLRYLPKILNFLRLQRF-----AKTLPG----PTIGE---LIANVKKGEIL 53

Zfish    67 -FLRMKRQKYGCIYKTHLFGNPTVRVMGADNVRQILLGEHKLVSVQ--------WPASVRTILGS 122
             :|:..|:|:|.:::.....:..|.....::::| |||.::|::..        |       ||.
  Fly    54 NWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQ-LLGNNQLLTKSRNYELLEPW-------LGK 110

Zfish   123 DTLSNVHGVQHKNKKKAIMRAFSRDALEHYIPVIQQEVKSAIQEWLQKDSCVLV----------- 176
            ..|:| .|.....::|.:...|      |:      .:.|..:|.::::..:||           
  Fly   111 GLLTN-GGESWHRRRKLLTPGF------HF------RILSEFKEPMEENCRILVRRLRTKANGES 162

Zfish   177 ---YPEMKKLMFRIAMRILLGFEPEQIKTDEQELVEAFEE----MIKNLFSL--PIDVPFSGLYR 232
               ||.:............:|.:.......:.|.|:|.:.    |.|..||.  .::|.|.....
  Fly   163 FDIYPYITLFALDAICETAMGIKKHAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKP 227

Zfish   233 GLR---ARNFIHSKIEENIR-------------KKIQDDDNENEQKYKDALQLLIENSRRSDEPF 281
            |..   |...:|.:....||             |...:.|:...::....|.:|:..........
  Fly   228 GKEREAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAEL 292

Zfish   282 SLQAMKEAATELLFGGHETTASTATSLVMFLGLNTEVVQKVREEVQEKVEMGMYTPGKGLSMELL 346
            |...::|.....:|.||:||:|.....:..|..|.:|.|:..||..|            |.....
  Fly   293 SDTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASE------------LEGREK 345

Zfish   347 DQLKYTGCVIKETLRINPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADVFPNKDEFQ 411
            :.:.|...||||||||.|.||...|..|:..|:....:|||.::...|...|.....||:.:.|.
  Fly   346 ESMPYLEAVIKETLRIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFD 410

Zfish   412 PERFM--SKGLEDGSRFNYIPFGGGSRMCVGKEFAKVLLKIFLVELTQHCNWILSNGPPTMKTGP 474
            |:||:  .|.:..   |.:..|..|.|.|:|::||.:.||..|..|.:...::     |.....|
  Fly   411 PDRFLVNEKQMHP---FAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFL-----PDKDHQP 467

Zfish   475 TVYPVDNLPTKFTSYVR 491
            .  |:..|.||..:.:|
  Fly   468 K--PLAELVTKSGNGIR 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cyp26a1NP_571221.2 p450 14..487 CDD:299894 120/528 (23%)
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 110/483 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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