DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyp26a1 and Cyp4d2

DIOPT Version :9

Sequence 1:NP_571221.2 Gene:cyp26a1 / 30381 ZFINID:ZDB-GENE-990415-44 Length:492 Species:Danio rerio
Sequence 2:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster


Alignment Length:495 Identity:122/495 - (24%)
Similarity:217/495 - (43%) Gaps:63/495 - (12%)


- Green bases have known domain annotations that are detailed below.


Zfish    15 VLPVLLFL--AAVKLWEMLMIRRVDPNCRSPLPPGTMGLPFIGETLQLILQR-------RKFLRM 70
            |:.|||.:  |.:.||:.|..||     .:.:.||...|||:|   .|::.|       ..|::.
  Fly     4 VVGVLLLVAFATLLLWDFLWRRR-----GNGILPGPRPLPFLG---NLLMYRGLDPEQIMDFVKK 60

Zfish    71 KRQKYGCIYKTHLFGNPTVRVMGADNVRQILLGEHKLVSVQWPASVRTILGSDTLSNVHGVQHKN 135
            .::|||.:|:..:.....|......::..:|..:..:........:...||...|.:. |.:...
  Fly    61 NQRKYGRLYRVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLGDGLLMST-GRKWHG 124

Zfish   136 KKKAIMRAFSRDALEHYIPVIQQEVKSAIQ-EWLQKD----SCVLVYPEMKKLMFRIAMRILLGF 195
            ::|.|...|....||.::.:..|:  ||:. |.||..    :.:.::|.:......|.....:|.
  Fly   125 RRKIITPTFHFKILEQFVEIFDQQ--SAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGT 187

Zfish   196 EPEQIKTDEQELVEAFEE----MIKN----------LFSL--PIDVPFSGLYRGLRARNFIHSKI 244
            :....|......|:|..:    :||.          :|.|  |.:..     |..:|...:|...
  Fly   188 KINAQKNPNLPYVQAVNDVTNILIKRFIHAWQRVDWIFRLTQPTEAK-----RQDKAIKVMHDFT 247

Zfish   245 EENIRKKIQDDDNENE------------QKYKDALQLLIENSRRSDEPFSLQAMKEAATELLFGG 297
            |..||::.:...|.::            ||.:.||..::..|.....|.|.:.::|.....:|.|
  Fly   248 ENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTIDGAPLSDEDIREEVDTFMFEG 312

Zfish   298 HETTASTATSLVMFLGLNTEVVQKVREEVQEKVEMGMYTPGKGLSMELLDQLKYTGCVIKETLRI 362
            |:||.|..:..:..:..:.||.|::::|:::.:.....:|   :::..|.:||:...||||:||:
  Fly   313 HDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSP---VTLRDLGELKFMENVIKESLRL 374

Zfish   363 NPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADVFPNKDEFQPERFMSKGLEDGSRFN 427
            :||||...|...:..|:.|..||.|.|....|.......:.|.:.|||:|||| ...:.....:.
  Fly   375 HPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERF-DADVPQIHPYA 438

Zfish   428 YIPFGGGSRMCVGKEFAKVLLKIFLVELTQHCNWILSNGP 467
            ||||..|.|.|:|::||.:.:|..:.:|.:|.. :|..||
  Fly   439 YIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFE-LLPLGP 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cyp26a1NP_571221.2 p450 14..487 CDD:299894 122/495 (25%)
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 112/462 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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