Sequence 1: | NP_001124485.1 | Gene: | Arvcf / 303798 | RGDID: | 1306655 | Length: | 973 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036444.1 | Gene: | p120ctn / 3355143 | FlyBaseID: | FBgn0260799 | Length: | 781 | Species: | Drosophila melanogaster |
Alignment Length: | 669 | Identity: | 274/669 - (40%) |
---|---|---|---|
Similarity: | 381/669 - (56%) | Gaps: | 91/669 - (13%) |
- Green bases have known domain annotations that are detailed below.
Rat 284 STATRRRPEYGRGLR-----ARALEDTADDTGELVEE--RPPFPAATAPLAQPERGSLGSLDRVV 341
Rat 342 RRSPS-VDSTRKEPRWRDPELPEVLAMLRHPVDPVKANAAAYLQHLCFENEGIKRRVRQLRGLPL 405
Rat 406 LVALLDHPRAEVRRRACGALRNLSYGRDAD-NKAAIRDCGGVPALVRLLRAARDNEVRELVTGTL 469
Rat 470 WNLSSYEPLKMVIIDHGLQTLTHEVIVPHSGWEREPNEDSKPRDAE------WTTVFKNTSGCLR 528
Rat 529 NVSSDGAEARRRLRECEGLVDALLHALQSAVGRKDTDNKSVENCVCIMRNLSYHVHK-EVPGADR 592
Rat 593 YQEVEPG--IPGSAATSQRRRKDDASCFG-GKKAKGKKDAEADRNFD-TLDLPKRT----EAAKG 649
Rat 650 FELLYQPEVVRLYLSLLTESRNFNTLEAAAGALQNLSAGNWMWATYIRATVRKERGLPVLVELLQ 714
Rat 715 SETDKVVRAVAIALRNLSLDQRNKDLIGSYAMTELVR-----NVRNAQAPAHPSAHLEEDTVVAV 774
Rat 775 LNTIHEIVSDSLDNARSLLQARGVPALVALVASSQSVREA--KAASHVLQTVWSYKELRGALQRD 837
Rat 838 GW-----TKAHFQSASTAKGPKGTPNSGGFDDSTLPLVDKNLDGEKSTTRDVIPMDTLGPDGYST 897
Rat 898 VDRR-ERRTLGSDSIGDSS 915 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Arvcf | NP_001124485.1 | ARM | 356..474 | CDD:237987 | 65/118 (55%) |
HEAT_2 | 361..463 | CDD:290374 | 53/102 (52%) | ||
armadillo repeat | 361..386 | CDD:293788 | 14/24 (58%) | ||
armadillo repeat | 394..430 | CDD:293788 | 19/35 (54%) | ||
armadillo repeat | 437..472 | CDD:293788 | 18/34 (53%) | ||
ARM | 438..580 | CDD:237987 | 70/147 (48%) | ||
armadillo repeat | 479..530 | CDD:293788 | 22/56 (39%) | ||
ARM | 651..751 | CDD:237987 | 67/99 (68%) | ||
armadillo repeat | 651..687 | CDD:293788 | 24/35 (69%) | ||
armadillo repeat | 697..731 | CDD:293788 | 25/33 (76%) | ||
armadillo repeat | 738..783 | CDD:293788 | 20/49 (41%) | ||
armadillo repeat | 789..821 | CDD:293788 | 9/33 (27%) | ||
p120ctn | NP_001036444.1 | ARM | 227..341 | CDD:237987 | 61/113 (54%) |
armadillo repeat | 227..252 | CDD:293788 | 14/24 (58%) | ||
armadillo repeat | 260..296 | CDD:293788 | 19/35 (54%) | ||
armadillo repeat | 304..339 | CDD:293788 | 18/34 (53%) | ||
ARM | 307..442 | CDD:237987 | 70/145 (48%) | ||
armadillo repeat | 347..392 | CDD:293788 | 21/55 (38%) | ||
armadillo repeat | 515..556 | CDD:293788 | 26/40 (65%) | ||
ARM | 516..643 | CDD:237987 | 78/133 (59%) | ||
armadillo repeat | 562..596 | CDD:293788 | 25/33 (76%) | ||
armadillo repeat | 601..641 | CDD:293788 | 19/46 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 109 | 1.000 | Domainoid score | I6212 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1048 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 406 | 1.000 | Inparanoid score | I1836 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D125744at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm45523 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10372 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X765 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.970 |