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Protein Alignment hoxc5a and ftz
DIOPT Version :9
Sequence 1: | NP_571219.2 |
Gene: | hoxc5a / 30379 |
ZFINID: | ZDB-GENE-980526-533 |
Length: | 233 |
Species: | Danio rerio |
Sequence 2: | NP_477498.1 |
Gene: | ftz / 40834 |
FlyBaseID: | FBgn0001077 |
Length: | 410 |
Species: | Drosophila melanogaster |
Alignment Length: | 122 |
Identity: | 62/122 - (50%) |
Similarity: | 75/122 - (61%) |
Gaps: | 11/122 - (9%) |
- Green bases have known domain annotations that are detailed below.
Zfish 108 EGNMEVMEKPSGKSRTDDIKMETTSAIKQQTNSTQRQNQSQPQIYPW--MTKLHMSHESDGKRSR 170
||.....:.|..|| :||:.|:.|.......:....:.| :.:...|...|.||:|
Fly 203 EGISTPPQSPGEKS---------SSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTR 258
Zfish 171 TSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKL 227
.:||||||||||||||||||:||||||:|||.|.|:||||||||||||||.|||..|
Fly 259 QTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 315
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR45659 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.010 |
|
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