DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzd7a and smo

DIOPT Version :9

Sequence 1:NP_571214.2 Gene:fzd7a / 30369 ZFINID:ZDB-GENE-990415-223 Length:559 Species:Danio rerio
Sequence 2:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster


Alignment Length:518 Identity:129/518 - (24%)
Similarity:222/518 - (42%) Gaps:104/518 - (20%)


- Green bases have known domain annotations that are detailed below.


Zfish    69 HTNQEDAGLEVHQFYPLVKV-QCSMDLKFFLCSMYAPVCTVL---EQAIPPCRSLCERARQGCEA 129
            ||.:| ...:::.:|.|..| :|...::.|||:::.|.|..:   :....|...:|....:.|..
  Fly   118 HTEKE-LNDKLNDYYALKHVPKCWAAIQPFLCAVFKPKCEKINGEDMVYLPSYEMCRITMEPCRI 181

Zfish   130 LMNKFGFQWPERLRCEN--FPV-----------HGAGEICVGQNTSDAGSPTSNPTPYVPELITL 181
            |.|...|  |:.|||..  ||.           :|.|: |:....     ||.....|.|     
  Fly   182 LYNTTFF--PKFLRCNETLFPTKCTNGARGMKFNGTGQ-CLSPLV-----PTDTSASYYP----- 233

Zfish   182 QPNLVVRPNQQFTCPLQLKVPTYLKYHFMGEKDCGAPCEPTRPNGLMYFREEEVKFGRL--WVGI 244
                                         |.:.||..|:..     :|..:|..:..:|  |.| 
  Fly   234 -----------------------------GIEGCGVRCKDP-----LYTDDEHRQIHKLIGWAG- 263

Zfish   245 WSILCCVSTLFTVLTYLVDMRRF-RYPERPIIFLSGCYFMVAVAYAAGFF--LEDKVVCIDKFSD 306
              .:|.:|.||.|.|:.:|.:.. :||...:.:::.|:.:..|.:...|.  ..:.:||    ..
  Fly   264 --SICLLSNLFVVSTFFIDWKNANKYPAVIVFYINLCFLIACVGWLLQFTSGSREDIVC----RK 322

Zfish   307 DGYKTVAQGTKKE--GCTILFMILYFFGMASSIWWVILSLTWFLSAGMKWGH--EAIEANSQYFH 367
            ||....::.|..|  .|.::|:::|:|..|..:|:|.|:..|...|   .||  :.|:....|||
  Fly   323 DGTLRHSEPTAGENLSCIVIFVLVYYFLTAGMVWFVFLTYAWHWRA---MGHVQDRIDKKGSYFH 384

Zfish   368 LAAWAVPAVKTITILAMGQVDGDMLTGVCYVGIYNVDSLRGFVLAPLFVYLFIGTSFLLAGFVSL 432
            |.||::|.|.|||.:|..:|||:.:.|:|:||..|.....|.:|.||...:.||..|:..|.|.|
  Fly   385 LVAWSLPLVLTITTMAFSEVDGNSIVGICFVGYINHSMRAGLLLGPLCGVILIGGYFITRGMVML 449

Zfish   433 FRIRTIMKH------DGTKTEKLEKLMVRIGVFSVLYTVPATIVIACYFYEQAFREQWEKTW-HM 490
            |.    :||      ..:.:.|:..:::|:||.::|..|...:.|||:..|....::|.::: ..
  Fly   450 FG----LKHFANDIKSTSASNKIHLIIMRMGVCALLTLVFILVAIACHVTEFRHADEWAQSFRQF 510

Zfish   491 QTCKRFAV-----PCPVNNFAPMSPDFTVFMIKYLMTMIVGITSGFWIWSGKTLQSWRRFYKR 548
            ..||..:|     .|.:.|    .|...|..:..|.....||....|.|:..::::|:|:.::
  Fly   511 IICKISSVFEEKSSCRIEN----RPSVGVLQLHLLCLFSSGIVMSTWCWTPSSIETWKRYIRK 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzd7aNP_571214.2 CRD_FZ 41..163 CDD:382974 27/110 (25%)
7tm_GPCRs 228..558 CDD:391938 94/342 (27%)
TM helix 1 238..262 CDD:341315 9/25 (36%)
TM helix 2 271..292 CDD:341315 2/20 (10%)
TM helix 3 322..344 CDD:341315 7/21 (33%)
TM helix 4 365..381 CDD:341315 10/15 (67%)
TM helix 5 403..426 CDD:341315 7/22 (32%)
TM helix 6 454..479 CDD:341315 9/24 (38%)
TM helix 7 508..533 CDD:341315 5/24 (21%)
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 27/106 (25%)
Frizzled 246..568 CDD:279827 94/339 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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