DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzd10 and Corin

DIOPT Version :9

Sequence 1:NP_570992.2 Gene:fzd10 / 30366 ZFINID:ZDB-GENE-990415-220 Length:580 Species:Danio rerio
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:660 Identity:129/660 - (19%)
Similarity:207/660 - (31%) Gaps:232/660 - (35%)


- Green bases have known domain annotations that are detailed below.


Zfish    30 PGEGRCQEIAIPLCK--DIGYNLTVMPNLMGHEDQNEAAIKLHEFAPLIEFGCHSHLKFFLCSLY 92
            |..|.|..|.:..|:  .|.||.||.||.:||..|.|....|..:..|::..|:..:..|||:|:
  Fly   774 PAPGTCLPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLF 838

Zfish    93 APMCTEQVSTPIPACRVMCEQARQKCSPIMEQFNFHWPESLDC---SRLPNKNDPNYLCMEAPNN 154
            .|.|.:..:| :|.|:.:|.:..::|....:.|....||.|:|   ...|:..|    |:     
  Fly   839 VPKCGQSGAT-VPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSED----CV----- 893

Zfish   155 GTDE---------PPKGSHTQSPDSR--PPRPGNSQELPIKERVGKTTCS--NPGKFH------- 199
            |.||         .||....|...:|  |........|...::..:..|.  .|.:.:       
  Fly   894 GLDEVREVMRAATHPKCDGFQCDQNRCLPQEYVCDGHLDCMDQADEAKCERCGPDEIYCGDSQCI 958

Zfish   200 -------------YVQKSESCAPKCYSNVDV------YWSQGDKRFSMVWIAIW------SILCF 239
                         |.|...:|......|.||      .:..|.:::....:..|      |.:|.
  Fly   959 GTKHICDGIIDCPYGQDERNCLRLSERNGDVGTGVLEVYRIGQRQWMPACVKNWDRAVSPSAVCS 1023

Zfish   240 I-----SSAFTVLTFLIDPQRFKYPERPII-FLSMSYCVYSV-----GFLVRLFVGVE------- 286
            |     .:|.:|||.|        ..||:: .:::|..::.:     ..|::.|...:       
  Fly  1024 ILGYSAVNATSVLTQL--------THRPLLATVNVSTDIWKMYAKRKSTLMQEFANCKKTEDYPM 1080

Zfish   287 ------NVACDRDTGVQYIIQEGLESTGCTIV-----------FL---------ILYYFGMASSL 325
                  |..|.|       ::.|.......|:           ||         |.|..|     
  Fly  1081 ADLTCSNYECGR-------VKRGRHKPSRRIIGGTQASPGNWPFLAAILGGPEKIFYCAG----- 1133

Zfish   326 WWVILTLTWFLAAGKKWGHEAIEANSSYFHLAAWAIPAIKTIMILVMRKVAGDELTGVCYVG-SM 389
              |:::..|.|.|....|      |.|...|..|      ||.:.|.|:      ....|.| .:
  Fly  1134 --VLISDQWVLTASHCVG------NYSVIDLEDW------TIQLGVTRR------NSFTYSGQKV 1178

Zfish   390 DVKALTGFVLIPLSCYLIIGTSFLLSGFVALFHIRKVMKTEGENTDKLEKLMVRIGVFSVLYTV- 453
            .|||     :||                    |.:..|....:|...|.:|..|:.....|..| 
  Fly  1179 KVKA-----VIP--------------------HPQYNMAIAHDNDIALFQLATRVAFHEHLLPVC 1218

Zfish   454 ----------PAT-CVIACYFYERLNMDYWKILAGEQKCADDGKSGEECVMKSSIPAVEIFMVKI 507
                      |.| |.:..:              |:::..|...:.|..|.:..:|.:.......
  Fly  1219 LPPPSVRNLHPGTLCTVIGW--------------GKREDKDPKSTYEYIVNEVQVPIITRNQCDE 1269

Zfish   508 FM--------LLVVGITSGMWIWTSKTLQSWQNVFSRKLKKKTRRKAACVFTGSGPYLKPHPALK 564
            ::        ::..|...|                         .|.||.....||.|.|:|   
  Fly  1270 WLDNLTVSEGMVCAGFDDG-------------------------GKDACQGDSGGPLLCPYP--- 1306

Zfish   565 GHKTKYEPAG 574
            |.|.::...|
  Fly  1307 GEKNRWFVGG 1316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzd10NP_570992.2 CRD_FZ 31..157 CDD:382974 38/130 (29%)
7tmF_FZD10 217..535 CDD:320165 64/394 (16%)
TM helix 1 226..251 CDD:320165 8/35 (23%)
TM helix 2 260..281 CDD:320165 4/26 (15%)
TM helix 3 310..336 CDD:320165 8/45 (18%)
TM helix 4 353..369 CDD:320165 4/15 (27%)
TM helix 5 391..420 CDD:320165 5/28 (18%)
TM helix 6 440..467 CDD:320165 7/38 (18%)
TM helix 7 496..521 CDD:320165 3/32 (9%)
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 36/125 (29%)
LDLa 911..942 CDD:238060 4/30 (13%)
LDLa 945..979 CDD:238060 3/33 (9%)
SR 980..>1034 CDD:214555 9/53 (17%)
SRCR 992..1086 CDD:278931 15/101 (15%)
Tryp_SPc 1103..1343 CDD:214473 55/306 (18%)
Tryp_SPc 1104..1346 CDD:238113 55/305 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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