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Protein Alignment hoxc6a and zen2
DIOPT Version :9
Sequence 1: | NP_571198.1 |
Gene: | hoxc6a / 30346 |
ZFINID: | ZDB-GENE-990415-113 |
Length: | 231 |
Species: | Danio rerio |
Sequence 2: | NP_476794.1 |
Gene: | zen2 / 40827 |
FlyBaseID: | FBgn0004054 |
Length: | 252 |
Species: | Drosophila melanogaster |
Alignment Length: | 149 |
Identity: | 50/149 - (33%) |
Similarity: | 82/149 - (55%) |
Gaps: | 34/149 - (22%) |
- Green bases have known domain annotations that are detailed below.
Zfish 94 LNAQSHVAQEYNLEQARAGTQDQKANNIQIYPWMQRMN---SHSGVGYGSDR-RRGRQIYSRYQT 154
:.::::....|:: :::.:||.:: :| :.:.....|:: :|.|..:|..|.
Fly 4 IQSENYFVDNYSV------------SDLMMYPCVE-LNVEAAPTATTRSSEKSKRSRTAFSSLQL 55
Zfish 155 LELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKETN-------LTSTVPGTES 212
:|||:|||.|:||.|.|||||:..|.|||||:||||||||||.||.|| ||:::|
Fly 56 IELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIP---- 116
Zfish 213 AGTPQETEKETEEEPKKKD 231
...::.|:.:|.|
Fly 117 ------LSSQSSEDLQKDD 129
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X14 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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