Protein Alignment hoxc4a and ftz

DIOPT Version :9

• Sequence 1: NP_571197.1
• Gene: hoxc4a / 30345
• ZFINID: ZDB-GENE-990415-112
• Length: 268
• Species: Danio rerio
• Sequence 2: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Alignment Length: 235
• Identity: 81/235 - (34%)
• Similarity: 108/235 - (45%)
• Gaps: 60/235 - (25%)

Zfish    19 PCEEYSQNSYIPEHSPEYYSRARDSGYQHHHQELYPPRASYQERQYNCASIPEPDTQRGHGLPHA 83
            |...|.| .|:...:|   |.:.|..|    .::|.|::..|:.:....:.|.|.|
  Fly   148 PAPSYDQ-EYVTVPTP---SASEDVDY----LDVYSPQSQTQKLKNGDFATPPPTT--------- 195

Zfish    84 GHLLGKGQSASCEPPPL------PLSPA--TPSAASSACNQATPEHPNSSASAKQPVVYPWMKKI 140
                      ....|||      |.||.  :.||.|...|......||.:..      :.|.
  Fly   196 ----------PTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGD------FNWS--- 241

Zfish   141 HVSTVNSSYNGAEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNR 205
            |:....:| :..:.||:|..|||.|.||||||||:|||:||||||:||::|.|||||||||||||
  Fly   242 HIEETLAS-DCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNR 305

Zfish   206 RMKWKKDH---------------RLPNTKVRSSSSTGISS 230
            |||.|||.               .||..:..|:::||..|
  Fly   306 RMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATTGAPS 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hoxc4a	NP_571197.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	70..129		15/66 (23%)
		Antp-type hexapeptide	133..138		1/4 (25%)
		Homeobox	157..210	CDD:278475	41/52 (79%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..268		7/34 (21%)
ftz	NP_477498.1	FTZ	1..248	CDD:281812	28/135 (21%)
		Homeobox	257..310	CDD:278475	41/52 (79%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.810