Protein Alignment Rnf43 and HRD1

DIOPT Version :9

• Sequence 1: XP_006247152.1
• Gene: Rnf43 / 303412
• RGDID: 1305204
• Length: 802
• Species: Rattus norvegicus
• Sequence 2: NP_014630.1
• Gene: HRD1 / 854149
• SGDID: S000005373
• Length: 551
• Species: Saccharomyces cerevisiae
• Alignment Length: 65
• Identity: 14/65 - (21%)
• Similarity: 33/65 - (50%)
• Gaps: 10/65 - (15%)

  Rat   264 SSSSSAPVCAICLEEF----------TEGQELRVISCLHEFHRTCVDPWLHQHRTCPLCMFNIVE 318
            :|::...:|.||::|.          .:.::.:.:.|.|..|.:|:..|:.:.:|||:|...:.:
Yeast   341 NSANDDNICIICMDELIHSPNQQTWKNKNKKPKRLPCGHILHLSCLKNWMERSQTCPICRLPVFD 405

  Rat   319  318
            Yeast   406  405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf43	XP_006247152.1	ZNRF_3_ecto	85..187	CDD:408039
		RING-H2_RNF43	270..316	CDD:319712	13/55 (24%)
		dnaA	598..>743	CDD:237605
HRD1	NP_014630.1	HRD1	5..551	CDD:227568	14/65 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910