DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hoxb6a and zen2

DIOPT Version :9

Sequence 1:NP_571194.1 Gene:hoxb6a / 30341 ZFINID:ZDB-GENE-990415-106 Length:228 Species:Danio rerio
Sequence 2:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster


Alignment Length:108 Identity:42/108 - (38%)
Similarity:58/108 - (53%) Gaps:9/108 - (8%)


- Green bases have known domain annotations that are detailed below.


Zfish   100 FVLSQDHRKTDCTGSTGKSIYPEADEQKPSAPVYPWMQRMNSCNGTFGNAGRRGRQTYTRYQTLE 164
            |.:..::...|....:...:||..:....:||         :.........:|.|..::..|.:|
  Fly     2 FAIQSENYFVDNYSVSDLMMYPCVELNVEAAP---------TATTRSSEKSKRSRTAFSSLQLIE 57

Zfish   165 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 207
            ||:|||.|:||.|.|||||:..|.|||||:||||||||||.||
  Fly    58 LEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKK 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hoxb6aNP_571194.1 Antp-type hexapeptide 132..137 0/4 (0%)
Homeobox 154..206 CDD:278475 33/51 (65%)
zen2NP_476794.1 Homeobox 46..99 CDD:278475 33/52 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.