DRSC/TRiP Functional Genomics Resources

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Protein Alignment cahz and CAH1

DIOPT Version :9

Sequence 1:NP_571185.1 Gene:cahz / 30331 ZFINID:ZDB-GENE-980526-39 Length:260 Species:Danio rerio
Sequence 2:NP_523561.1 Gene:CAH1 / 34786 FlyBaseID:FBgn0027844 Length:270 Species:Drosophila melanogaster


Alignment Length:267 Identity:132/267 - (49%)
Similarity:167/267 - (62%) Gaps:13/267 - (4%)


- Green bases have known domain annotations that are detailed below.


Zfish     1 MAHAWGYGPADGPESWAESFPIANGPRQSPIDIVPTQAQHDPSLK--HLKLKYDPATTKSILNNG 63
            |:|.|||...:||..||:.:|.|:|.||||:||.|:.|:....|.  .||.||.|..|||::|.|
  Fly     1 MSHHWGYTEENGPAHWAKEYPQASGHRQSPVDITPSSAKKGSELNVAPLKWKYVPEHTKSLVNPG 65

Zfish    64 HSFQVDFVDDDNSSTLAGGPI-TGIYRLRQFHFHWGSSDDKGSEHTIAGTKFPCELHLVHWN-TK 126
            :.::||....|  |.|.|||: ..|::|.|||.|||.:|.||||||:.|..:..|||||||| ||
  Fly    66 YCWRVDVNGAD--SELTGGPLGDQIFKLEQFHCHWGCTDSKGSEHTVDGVSYSGELHLVHWNTTK 128

Zfish   127 YPNFGEAASKPDGLAVVGVFLKIGAANPRLQKVLDALDDIKSKGRQTTF-ANFDPKTLLPASLDY 190
            |.:|||||:.||||||:|||||.|..:..|.||...|..:..||.:.|. ...||..|||....|
  Fly   129 YKSFGEAAAAPDGLAVLGVFLKAGNHHAELDKVTSLLQFVLHKGDRVTLPQGCDPGQLLPDVHTY 193

Zfish   191 WTYEGSLTTPPLLESVTWIVLKEPISVSPAQMAKFRSL-LFSSEGETPC-----CMVDNYRPPQP 249
            |||||||||||..|||.|||.|.||.||..|:...|:| .:..:.|.||     .:::|:|||.|
  Fly   194 WTYEGSLTTPPCSESVIWIVFKTPIEVSDDQLNAMRNLNAYDVKEECPCNEFNGKVINNFRPPLP 258

Zfish   250 LKGRKVR 256
            |..|::|
  Fly   259 LGKRELR 265

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
cahzNP_571185.1 alpha_CA_I_II_III_XIII 1..259 CDD:239393 132/267 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 15/29 (52%)