Protein Alignment hoxd4a and Antp

DIOPT Version :10

• Sequence 1: NP_001119917.1
• Gene: hoxd4a / 30329
• ZFINID: ZDB-GENE-980526-214
• Length: 256
• Species: Danio rerio
• Sequence 2: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 247
• Identity: 93/247 - (37%)
• Similarity: 112/247 - (45%)
• Gaps: 66/247 - (26%)

Zfish     2 EGGKKDNSRKISISYLQKLMAMSSYMVNSK----YVDPKFPPCEEYSQNSY----IPEQS--PGY 56
            |||......::|..::...|.:..:|.:.:    |.|...|...|..||.:    ..:||  |..
  Fly   176 EGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPV 240

Zfish    57 YSPSQDTDFQHPGIYSRSNYSEQPYSCSTVQGSSVQPRGHVQDQASTPSPFPAQTEQCPAVQISG 121
            .:|.|  ...|.|                 ||.....:|| ..|.:.||       |.|..|.||
  Fly   241 GAPPQ--GMMHQG-----------------QGPPQMHQGH-PGQHTPPS-------QNPNSQSSG 278

Zfish   122 SRTGGQQQNTKTQNGIPTKQPAVVYPWMKKVHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFH 186
                               .|:.:||||:......       .|.||.|..|||.|.||||||||
  Fly   279 -------------------MPSPLYPWMRSQFGKC-------QERKRGRQTYTRYQTLELEKEFH 317

Zfish   187 FNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSASVG 238
            |||||||||||||||.|||:|||||||||||||||||::|   |||...|.|
  Fly   318 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK---TKGEPGSGG 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hoxd4a	NP_001119917.1	Homeodomain	167..223	CDD:459649	48/55 (87%)
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	41/182 (23%)
		Homeodomain	298..354	CDD:459649	48/55 (87%)