DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment cyt1 and LamC

DIOPT Version :9

Sequence 1:	NP_571182.1	Gene:	cyt1 / 30327	ZFINID:	ZDB-GENE-991008-6	Length:	429	Species:	Danio rerio
Sequence 2:	NP_001260974.1	Gene:	LamC / 36615	FlyBaseID:	FBgn0010397	Length:	640	Species:	Drosophila melanogaster

Alignment Length:	452	Identity:	121/452 - (26%)
Similarity:	201/452 - (44%)	Gaps:	90/452 - (19%)

- Green bases have known domain annotations that are detailed below.

Zfish    44 RISSSSASRSYSAGGGAGFGGGAGAGFNLSDAIDVPTNEKATMQNLNDRLASYLEKVRSLEKANA 108
            |:|.:|.|   :..|||......||....|........||..:|:||||||.|::::|:||..|:
  Fly    11 RVSRASTS---TPVGGASTSSRVGATSPTSPTRTSRQQEKEELQHLNDRLACYIDRMRNLENENS 72

Zfish   109 DL--ELKI-----------------------RQFLDSKATPNAR-------------------DY 129
            .|  ||.:                       |:.||..|...|:                   |.
  Fly    73 RLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLKPRLDK 137

Zfish   130 SAYYATISDLQAKIL--HATGVNGGIYLSIDNAKLAADDFR-VKYENELSMRQSVEADIVGLRKV 191
            ....||:::..|::.  ....|||....|:.:.|...|..: :..|||...||     :..|||.
  Fly   138 KTKEATVAENNARLYENRYNEVNGKYNQSLADRKKFEDQAKELALENERLRRQ-----LDDLRKQ 197

Zfish   192 LDELTMTRSDLELQIEGLKEELIFLKKNHEEELLAAR-------TQMSGQVNVEVDAAPQEDLTK 249
            |:..|:.|.|||.|.:.|:|||.|..:.|.:||...|       :::.|:::.:.:|..|:.
  Fly   198 LEAETLARVDLENQNQSLREELAFKDQVHTQELTETRSRRQIEISEIDGRLSRQYEAKLQQS--- 259

Zfish   250 ILADIREHYEAVSAKNRKDLESWFQAKSESLNKEV-------AVSTETLQTSRSEITEVKRTLQS 307
             |.::|:.||.....||:::|..:..:.::|....       |::||.::..|::|..:...||:
  Fly   260 -LQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRAAQGSALATEEVRLMRTKIDGLNAKLQN 323

Zfish   308 LEIELQSQLSMKASLEGTLADTQARYTNMLNGYQFQVSSLEEQLIQLRADLERQGQEYQMLLDIK 372
            || :..:.|:.:......|.||:.:..|.      .::|||.:|.::|.::..|.||||.|:|||
  Fly   324 LE-DTNAGLNARIRELENLLDTERQRHNQ------YIASLEAELQRMRDEMAHQLQEYQGLMDIK 381

Zfish   373 TRLEMEIAEYRRLLDGE----------ATTVSTSSSTTRKVVTIVEEVVDGKVVSSSSKATT 424
            ..|::|||.|.:||.||          ..|..:..|:....:|.......|:|..|..::.|
  Fly   382 VSLDLEIAAYDKLLCGEERRLNIESPGRPTTDSGISSNGSHLTASASSRSGRVTPSGRRSAT 443

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
cyt1	NP_571182.1	Filament	81..389	CDD:278467	102/368 (28%)
cyt1	NP_571182.1	Wzz	<234..383	CDD:302979	42/155 (27%)
LamC	NP_001260974.1	Filament	45..401	CDD:278467	104/371 (28%)
		ATP-synt_B	<67..>142	CDD:304375	12/74 (16%)
		MreC	<178..>224	CDD:302802	20/50 (40%)
		LTD	473..574	CDD:279300
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	0	0.000