DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc5a10 and CG31262

DIOPT Version :9

Sequence 1:NP_001100477.1 Gene:Slc5a10 / 303205 RGDID:1305232 Length:596 Species:Rattus norvegicus
Sequence 2:NP_001138069.2 Gene:CG31262 / 318649 FlyBaseID:FBgn0051262 Length:579 Species:Drosophila melanogaster


Alignment Length:609 Identity:132/609 - (21%)
Similarity:229/609 - (37%) Gaps:159/609 - (26%)


- Green bases have known domain annotations that are detailed below.


  Rat    15 QLSTSDIIVISLYFALNVAVGVWTAC----RANKNTVS--------------GYFLAGRDMAWWP 61
            :..|.|.:|:.....|:...|::...    ..||.:||              .|.:..|:|...|
  Fly     5 RFGTVDYLVLVAMTLLSTGTGIYFGALKKKHKNKKSVSEDNRRTNFGSEKIDEYLMGSRNMKVIP 69

  Rat    62 IGASLFASSEGSGLFIGLAGSGAAGGLAVAGFEWNATYVL---------LALAWVFVPIYVSSEI 117
            :..:|:..:.    .||....         .:.:...|.|         :|.::|::|:|.:.:|
  Fly    70 VSITLYRVTS----IIGTPSE---------IYHYGTQYYLIIVAIILQGIAFSYVYLPVYSALQI 121

  Rat   118 VTLPEYIQKRFGGQRIRMYLSVLSLLLSVFTKISIDLYAGALFVHICLGWNFYLSTILTLAITAL 182
            .:..||:..|| ...||...|.: .:..:.|.:...:|..||.:....|.|.:|..::.:.....
  Fly   122 GSAYEYLGLRF-NSIIRTTASFM-YVFGILTYLPFIVYVPALSLSQVSGLNTHLIGLVIILACVT 184

  Rat   183 YTIAGGLATVIYTDALQTAIMVVGAVILAVKAFNQIGG----YEQLEAA----YAQATPSRTIPN 239
            ||..|||..|::||..|.|:|.:..|.:|..|.....|    ::..|..    .|...||..:.:
  Fly   185 YTFMGGLKAVVHTDVWQVAVMFLSLVAVAFLAIYYSNGLVAVFDDAEQGGRLMLANTNPSPYVRH 249

  Rat   240 TTCHLPRADAMHMFRDPSTGDLPWTGMTFGLTIMATWYWCT----DQVIVQRSLSARNLNHAKAG 300
            |.                     |:.:..|.:     :|.:    .|.:|||.:|..:|..::..
  Fly   250 TV---------------------WSVLIGGFS-----FWTSVNAGGQHMVQRYMSLPSLKKSRQA 288

  Rat   301 SILASYLKMLPMGLMIMPGMISRVLF-------PDDVGCVVPSECLRACGAEIGCSNIAYPKLVM 358
            |.:.:....:.:.|....|::   ||       |...|.::..:                     
  Fly   289 SFIFTIGVSIFIALCCFMGLL---LFSKYKDCDPRSAGMILNDD--------------------- 329

  Rat   359 ELMPI----------GLRGLMIAVMMAALLSSLTSIFNSSSTLFTMDIWRQ-FRPGAGERELLLV 412
            :|:|:          |:.||.||.:..|.||||:|.||:.|.:|..||.|. |:....||:..::
  Fly   330 QLLPLFVVQSVGHIYGMPGLFIAGIFGAGLSSLSSCFNTVSMVFLEDIVRGFFKMEPSERQSTIL 394

  Rat   413 GRLVIV---VLVGVSVAWIPVLQGSNSGQLFIYMQSVTSSLAPPVTAIFLLGIFWRRANEQG-AF 473
            .:..|:   :|..:.|..:..|:|     :.....|::|..|.....:|.||:.:..||..| |.
  Fly   395 IKTCIIFQGILAFLIVFLLQHLRG-----ILSVCNSISSITAGTSFGVFTLGMLFPWANTIGTAV 454

  Rat   474 WGLMAGLLVGAL-----------------------RLVLEFLYPE-PHCGQIDTRPFPLGSIHYL 514
            .||.:.||.|.:                       ..|.....|| |...|  .:.|||..:.| 
  Fly   455 GGLSSVLLAGWISFGSQIAAASGQLKSGMLPVSVKECVGNVTLPEDPWVDQ--DQVFPLYRLSY- 516

  Rat   515 HFAIALFFLTCAVMAA-GSLLSPP 537
            |:...:..:|..|:.| .||::.|
  Fly   517 HWVSPIGVVTAVVVGALVSLITKP 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a10NP_001100477.1 SLC5-6-like_sbd 17..596 CDD:294310 132/607 (22%)
CG31262NP_001138069.2 SLC5sbd_NIS-SMVT 9..522 CDD:271383 125/585 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340234
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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