DRSC/TRiP Functional Genomics Resources

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Protein Alignment hoxb5a and unpg

DIOPT Version :9

Sequence 1:NP_571176.2 Gene:hoxb5a / 30317 ZFINID:ZDB-GENE-980526-70 Length:275 Species:Danio rerio
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:264 Identity:74/264 - (28%)
Similarity:108/264 - (40%) Gaps:57/264 - (21%)


- Green bases have known domain annotations that are detailed below.


Zfish    14 PNGPDYQLLNYGTSSSAM---NASYRDSGTMHSGSYGYNYNGMDLSVNRSTSTGHFGAVG----D 71
            |:..|.:.|.:..:::.:   :.|||....:.:..|.::     |||:....  |..|.|    |
  Fly   150 PHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHS-----LSVHARLQ--HMAAAGRMHED 207

Zfish    72 NSR----VFQSPAPETRFRQPSSCSLASP-EP-LPCSNSESLGPKGSSPPSDQSTTTAGNNLNS- 129
            .:.    ..|.|.|......|:.....|| || |.....|.....|.| .||.|.|.:..|.|. 
  Fly   208 QANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDS-CSDISLTMSPRNYNGE 271

Zfish   130 -----NTHFTEID-EASASSETEEASHRANNSAPRTQQKQETTATSTTSATSDGQAPQIFPWMRK 188
                 |..:|..| |..:..|..::.|.......:..|...:::.|.:                 
  Fly   272 MDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKS----------------- 319

Zfish   189 LHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRM 253
                        :|.|||:|..|.||||:|||..:||:...|.:||.:|.|||.|:||||||||.
  Fly   320 ------------RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRA 372

Zfish   254 KWKK 257
            |||:
  Fly   373 KWKR 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hoxb5aNP_571176.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..181 28/127 (22%)
Antp-type hexapeptide 182..187 0/4 (0%)
Homeobox 204..256 CDD:278475 31/51 (61%)
unpgNP_477146.1 Homeobox 324..375 CDD:278475 30/50 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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