DRSC/TRiP Functional Genomics Resources

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Protein Alignment wnt10b and Wnt10

DIOPT Version :9

Sequence 1:NP_835737.1 Gene:wnt10b / 30308 ZFINID:ZDB-GENE-980526-524 Length:427 Species:Danio rerio
Sequence 2:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster


Alignment Length:437 Identity:169/437 - (38%)
Similarity:238/437 - (54%) Gaps:84/437 - (19%)


- Green bases have known domain annotations that are detailed below.


Zfish    46 AVCLRLAGLTKKQMRLCVRSPDVTASALQGIQVAIHECQHQLRDQRWNCSSLENHGKLPHQSAIL 110
            |.|..:.||||.|:.||.::.||||:||:|:.:||.|||.|.:..|||||||....:.||.|::|
  Fly    74 ATCRSVPGLTKDQVELCYKASDVTAAALEGLDMAIRECQIQFQWHRWNCSSLSTKSRNPHASSLL 138

Zfish   111 NRGFRESAFSLSLLAAGVVHSVASACSLGKLRGCGCE--AKRRLDDDKIRLKLTQLQLQTFQRSG 173
            .:|:|||||:.::.||||.||||.|||.|:|..|||:  ..|:..:..:|..|.:.:.|..|   
  Fly   139 KKGYRESAFAFAISAAGVAHSVARACSQGRLMSCGCDPTINRKTLNKNLRQSLDKEKKQFLQ--- 200

Zfish   174 VSLAGAGENTPELSSLHGSLPANLHSSHPMSLLKPLPD---EVTMLQDTWEWGGCSHDIRFGVRF 235
                              .|..|       .:|.|..:   |.:.:...|:||||||::.|||.:
  Fly   201 ------------------YLETN-------QILTPEEEKKYERSKIASRWKWGGCSHNMDFGVEY 240

Zfish   236 SRDWLDSRGSPRDIHARTRIHNNRVGRQVVTDNMRRKCKCHGTSGSCQFKTCWYVSPEFRLVGSL 300
            |:.:||.|....||.::..:|||..||..|::||..:|||||.|||||.||||..:|:|.:||.:
  Fly   241 SKLFLDCREKAGDIQSKINLHNNHAGRIAVSNNMEFRCKCHGMSGSCQLKTCWKSAPDFHIVGKV 305

Zfish   301 LREKFLTAIFINSQNKNNG--------VFNSRTGGSTGS-------------------------- 331
            |:.:|..||.::..|..||        ..|.::.|.:||                          
  Fly   306 LKHQFRKAILVDQSNLGNGEPVVVLKRARNKKSNGGSGSGSTSPDLDSTDASGGHDDGGTGDSET 370

Zfish   332 ---DPL---RGQRR-----------RSISRELVYFEKSPDFCDREPAVDSLGTQGRICNKSSPGM 379
               |.|   ||.|:           |.:...|.|:::||:||:|:...|..||.||.||:::...
  Fly   371 RRHDELGVERGTRQPSADKNAARMARKLETSLFYYQRSPNFCERDLGADIQGTVGRKCNRNTTTS 435

Zfish   380 DGCGSLCCGRGHNILKQARSERCHCRFHWCCYVLCEECKVTEWVNVC 426
            |||.||||||||:.:.|.|:|||||:|.|||.|.||||.|.||:::|
  Fly   436 DGCTSLCCGRGHSQVIQRRAERCHCKFQWCCNVECEECHVEEWISIC 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wnt10bNP_835737.1 wnt 50..427 CDD:306592 167/433 (39%)
Wnt10NP_609109.3 wnt 82..466 CDD:278536 155/411 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586756
Domainoid 1 1.000 324 1.000 Domainoid score I1173
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20721
Inparanoid 1 1.050 329 1.000 Inparanoid score I2436
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1241694at2759
OrthoFinder 1 1.000 - - FOG0004126
OrthoInspector 1 1.000 - - otm25052
orthoMCL 1 0.900 - - OOG6_107889
Panther 1 1.100 - - LDO PTHR12027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2869
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.760

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