DRSC/TRiP Functional Genomics Resources

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Protein Alignment her4.5 and E(spl)mbeta-HLH

DIOPT Version :10

Sequence 1:NP_571165.3 Gene:her4.5 / 30301 ZFINID:ZDB-GENE-081031-106 Length:152 Species:Danio rerio
Sequence 2:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster


Alignment Length:188 Identity:50/188 - (26%)
Similarity:77/188 - (40%) Gaps:49/188 - (26%)


- Green bases have known domain annotations that are detailed below.


Zfish    13 ETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEFVKQQPD--SRQEKADILEMTLDFLR--RS 73
            :|....|:.|||:|:.||.|||..:::||.::. |.:.|:.:  :|.|||||||:|::.::  |:
  Fly     9 KTYQYRKVMKPMLERKRRARINKCLDELKDIMV-ECLTQEGEHITRLEKADILELTVEHMKKLRA 72

Zfish    74 QK----SSAAGD-----------------GRSRCVQEAVSFLSQCP-VQTQSHTRLMKLFLH--- 113
            ||    ||..|.                 |......|....|:..| |.....|:||....|   
  Fly    73 QKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQLMSHLGHRLN 137

Zfish   114 --------------MQTPADQHTRVDNPQTTETHANSSAKQHTPAHSH-----IWRPW 152
                          :|.|.:....|..|.:......|.|....|:.:.     :||||
  Fly   138 YLQVVVPSLPIGVPLQAPVEDQAMVTPPPSECDSLESGACSPAPSEASSTSGPMWRPW 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
her4.5NP_571165.3 bHLH-O_HES5 19..77 CDD:381467 26/65 (40%)
ORANGE 77..123 CDD:128787 13/80 (16%)
E(spl)mbeta-HLHNP_524505.2 bHLH-O_ESMB_like 7..75 CDD:381584 26/66 (39%)
ORANGE 97..141 CDD:128787 9/43 (21%)

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