DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HADHA and hadha

DIOPT Version :10

Sequence 1:NP_000173.2 Gene:HADHA / 3030 HGNCID:4801 Length:763 Species:Homo sapiens
Sequence 2:NP_989224.1 Gene:hadha / 394832 XenbaseID:XB-GENE-959219 Length:760 Species:Xenopus tropicalis


Alignment Length:762 Identity:590/762 - (77%)
Similarity:678/762 - (88%) Gaps:3/762 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MVACRAIGILSRFSAFRILRSRGYICRNFTGSSALLTRTHINYGVKGDVAVVRINSPNSKVNTLS 65
            |.|.|.:|:|:|...   ....||.||:.:.|||||||||:||.:|.||||||.|:|||||||||
 Frog     1 MAAARLVGVLARLGG---ANRTGYTCRHLSMSSALLTRTHVNYEIKDDVAVVRFNTPNSKVNTLS 62

Human    66 KELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTLQEVTQLSQEAQRIVEKL 130
            |:|.:|||:|||||||:|.::||||||||||||||||||||:.:|||.|||||||||.|::..||
 Frog    63 KQLQTEFSDVMNEIWANDAVQSAVLISSKPGCFIAGADINMIESCKTSQEVTQLSQEGQKMFAKL 127

Human   131 EKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVP 195
            |||.||||||||||||||||||||:||||:||||:||||||||||||.|||||||||||:|||:|
 Frog   128 EKSPKPIVAAINGSCLGGGLEVAIACQYRVATKDKKTVLGTPEVLLGLLPGAGGTQRLPRMVGLP 192

Human   196 AALDMMLTGRSIRADRAKKMGLVDQLVEPLGPGLKPPEERTIEYLEEVAITFAKGLADKKISPKR 260
            .|.|||||||:|||||||:||||||||:|||||||.||:||||||||||:..|:|:|.||||.|:
 Frog   193 TAFDMMLTGRNIRADRAKRMGLVDQLVDPLGPGLKSPEDRTIEYLEEVAVDCARGIAKKKISLKK 257

Human   261 DKGLVEKLTAYAMTIPFVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLCESQ 325
            :|||::|:|.|.|::||||||:||.||:||.||||||||||||||:||:||::||.:||||.|:|
 Frog   258 EKGLMQKVTDYVMSVPFVRQQIYKTVEKKVNKQTKGLYPAPLKIIEVVRTGLDQGQEAGYLAEAQ 322

Human   326 KFGELVMTKESKALMGLYHGQVLCKKNKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILK 390
            |||||..|.|||||:|||||||:|||||||.|::.|:.|||||||||||||||||||||||||||
 Frog   323 KFGELGTTPESKALIGLYHGQVICKKNKFGTPERPVQKLAILGAGLMGAGIAQVSVDKGLKTILK 387

Human   391 DATLTALDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDLSLK 455
            |.|:..|.||||||:||||||||||:|||||||||.|||||||||:|||.|||||||||||:.:|
 Frog   388 DTTVEGLGRGQQQVYKGLNDKVKKKSLTSFERDSIVSNLTGQLDYKGFETADMVIEAVFEDIRIK 452

Human   456 HRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKD 520
            |:||:|||||:|.||||||||||||||:|||.|||||||||||||||||||||||||||:|||||
 Frog   453 HKVLQEVEAVVPPHCIFASNTSALPISQIAAASKRPEKVIGMHYFSPVDKMQLLEIITTDKTSKD 517

Human   521 TSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLDSLTTSFGFPVGAA 585
            |:|:|||||||||||||||||||||||||||.|||:||:|:|||||||||||:|:|.|||||||:
 Frog   518 TTAAAVAVGLKQGKVIIVVKDGPGFYTTRCLGPMMAEVVRVLQEGVDPKKLDALSTGFGFPVGAS 582

Human   586 TLVDEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKSGKGFYIYQEGVKRKDLNS 650
            ||.||||:|||.||||||||.|||||||||.|||..||:||||||||||||||||:|||.:.:||
 Frog   583 TLADEVGIDVAAHVAEDLGKAFGERFGGGNIELLKAMVAKGFLGRKSGKGFYIYQQGVKNRSINS 647

Human   651 DMDSILASLKLPPKSEVSSDEDIQFRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLG 715
            ..:.||...||..|.||||:||||.||||||||||||||||||||.|.|||||||||||||||||
 Frog   648 GTEEILEKFKLQAKPEVSSNEDIQLRLVTRFVNEAVMCLQEGILANPVEGDIGAVFGLGFPPCLG 712

Human   716 GPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPCQLLADHANSPNKKFY 762
            ||||:.|.:||::||::::|||:.||.||||||||.|||:.|:|||:
 Frog   713 GPFRYADAFGAKRIVEKMRKYESVYGSQFTPCQLLLDHASDPSKKFH 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HADHANP_000173.2 fa_ox_alpha_mit 27..762 CDD:131494 580/734 (79%)
hadhaNP_989224.1 fa_ox_alpha_mit 24..759 CDD:131494 580/734 (79%)

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