DRSC/TRiP Functional Genomics Resources

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Protein Alignment ihhb and hh

DIOPT Version :10

Sequence 1:NP_571163.1 Gene:ihhb / 30299 ZFINID:ZDB-GENE-980526-135 Length:412 Species:Danio rerio
Sequence 2:NP_001034065.1 Gene:hh / 42737 FlyBaseID:FBgn0004644 Length:471 Species:Drosophila melanogaster


Alignment Length:423 Identity:187/423 - (44%)
Similarity:258/423 - (60%) Gaps:36/423 - (8%)


- Green bases have known domain annotations that are detailed below.


Zfish     2 RLSTAAALLTGFI-LAFSPAYDGCGPGRGYGKRRTPRKLTPLAYKQFSPNVAEKTLGASGRYEGK 65
            ||::..|||...: :.||||: .||||||.|:.|. |.|.||..||..||::|.|..|||..||.
  Fly    63 RLTSLVALLLIVLPMVFSPAH-SCGPGRGLGRHRA-RNLYPLVLKQTIPNLSEYTNSASGPLEGV 125

Zfish    66 VTPSSERFKELTPNYNPDIIFKDEENTGADRMMTQRCKDKLNSLAISVMNLWPGVRLRVTEGWDE 130
            :...|.:||:|.||||.||:|:|||.|||||:|::|||:|||.||.||||.|||:||.|||.|||
  Fly   126 IRRDSPKFKDLVPNYNRDILFRDEEGTGADRLMSKRCKEKLNVLAYSVMNEWPGIRLLVTESWDE 190

Zfish   131 DGLHSEESLHYEGRAVDITTSDRDRNKYRMLARLAVEAGFDWVYYESKGHVHCSVKSEHSVAAKT 195
            |..|.:||||||||||.|.|||||::||.||||||||||||||.|.|:.|::|||||:.|:::..
  Fly   191 DYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWVSYVSRRHIYCSVKSDSSISSHV 255

Zfish   196 GGCFPGRALVTMKDGSHRQIRDLQAGDLVLASEGSDGTGDLIYSEVLTFLDRRPITQKHFYVIRT 260
            .|||...:...::.|..:.:.:|..||.||:...:   |..:||||:.|:||.....::|..:.|
  Fly   256 HGCFTPESTALLESGVRKPLGELSIGDRVLSMTAN---GQAVYSEVILFMDRNLEQMQNFVQLHT 317

Zfish   261 EDGASVSLTAAHLLFMRVGNCSNRGEPKPGAVRTIFASDAQVGQCLLL-----GKLRKRFSQITH 320
            :.||.:::|.|||:.:        .:|:...:..:||...:....:|:     |:||.:  ::..
  Fly   318 DGGAVLTVTPAHLVSV--------WQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQ--RVVK 372

Zfish   321 VGVREDQGLYPPLTAHGTVVVNDVLTSCYAAVNRQRLAHWAFAPLRL---LYSWTGPDQVL---- 378
            ||....:|:..|||..||:|||.|..||||.:|.|.||||..||:||   |.:|....:.|    
  Fly   373 VGSVRSKGVVAPLTREGTIVVNSVAASCYAVINSQSLAHWGLAPMRLLSTLEAWLPAKEQLHSSP 437

Zfish   379 --------KNGLHWYSQVLIGLGKLLLDSELFH 403
                    :||:|||:..|..:...:|.....|
  Fly   438 KVVSSAQQQNGIHWYANALYKVKDYVLPQSWRH 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ihhbNP_571163.1 HH_signal 24..184 CDD:460055 103/159 (65%)
Hint 186..398 CDD:460051 70/231 (30%)
hhNP_001034065.1 HH_signal 85..243 CDD:460055 103/158 (65%)
Hint 254..465 CDD:460051 67/223 (30%)

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