DRSC/TRiP Functional Genomics Resources

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Protein Alignment HSD17B10 and SPOM_SPCC162.03

DIOPT Version :10

Sequence 1:NP_004484.1 Gene:HSD17B10 / 3028 HGNCID:4800 Length:261 Species:Homo sapiens
Sequence 2:NP_588241.1 Gene:SPOM_SPCC162.03 / 2539382 PomBaseID:SPCC162.03 Length:292 Species:Schizosaccharomyces pombe


Alignment Length:201 Identity:52/201 - (25%)
Similarity:87/201 - (43%) Gaps:44/201 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    14 VITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAP--------------AD 64
            :|||.:.|||.|..:..:.||.:.:.                  |..||              .|
pombe     9 LITGSSKGLGYALVKVGLAQGYNVIA------------------CSRAPDTITIEHSKLLKLKLD 55

Human    65 VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI 129
            ||..|.|:||...||.:||.||:.:|.||..:..:.      :::.:|:..|.::||..|...:.
pombe    56 VTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEF------ESYNIEEMHRQMNVNFWGVAYIT 114

Human   130 RLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAP-IGIRV 193
            :.....|.::     |:.|.|:..:|||.:......:.|:|||..:.|::..|.|:|.| ..|.:
pombe   115 KEALNLMRES-----GKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMRELDPNWNIAI 174

Human   194 MTIAPG 199
            ..:.||
pombe   175 TIVQPG 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HSD17B10NP_004484.1 HSD10-like_SDR_c 9..261 CDD:187629 52/201 (26%)
SPOM_SPCC162.03NP_588241.1 17beta-HSD-like_SDR_c 7..248 CDD:187632 52/201 (26%)

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