DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbx16 and bi

DIOPT Version :9

Sequence 1:NP_571133.1 Gene:tbx16 / 30264 ZFINID:ZDB-GENE-990615-5 Length:470 Species:Danio rerio
Sequence 2:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster


Alignment Length:611 Identity:195/611 - (31%)
Similarity:251/611 - (41%) Gaps:217/611 - (35%)


- Green bases have known domain annotations that are detailed below.


Zfish    16 PPSMPGA-------GDSY-------------HQ-------------------GNIRMTLEDPELW 41
            ||..|||       |.:|             ||                   .:.::|||..:||
  Fly   274 PPHHPGAHPHAHHLGSAYTTAEDVVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVTLEGKDLW 338

Zfish    42 RSFHEIGTEMIITKPGRRMFPHCKISLSGLVPYAKYILLVDMVPEDGLRYKWNKDKWEVAGKAEP 106
            ..||::||||:|||.||:|||..|..:|||...||||||:|:|..|..|||::..:|.|||||:|
  Fly   339 EKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADP 403

Zfish   107 QPPYRTYLHPDSPAPGSHWMKQPVSFLKLKLTNNALDQHGHI---ILHSMHRYHPRFHIVQADDL 168
            :.|.|.|:|||||..|..||::.|||.|||||||..|:||.:   ||:|||:|.||||:|:|:|:
  Fly   404 EMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRANDI 468

Zfish   169 YSVRWSVFQTFTFPETSFTAVTAYQNTKITKLKIDHNPFAKGFRDEGTNSKRRANRNLPDPERVA 233
            ..:.:|.|:|:.|.||.|.|||||||.|||:||||:|||||||||.|...:.             
  Fly   469 LKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKRE------------- 520

Zfish   234 KKMSKDSEHGSPQD-VQP----SSCEALDDEHAGR-------------------KELEVKAERYS 274
            ||.:..|..||..| :.|    ||...|...||||                   |.|:|.....|
  Fly   521 KKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVGPPQS 585

Zfish   275 P----------------------W----GGACDRDSGHA----------------LRPESPLGSD 297
            |                      |    .||....|.||                |:.::.:..|
  Fly   586 PLLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAAAAAANASAEDALRRRLQADADVERD 650

Zfish   298 HRDVYSSEQLVPGQNTYQPYRFHEYGKSPSPSSSSS----VGGSSACGSAG-RPSFESRVLDVAT 357
            ..|...||.:  |.:|...:|         |:|:.|    ||.::|..:|| .|...|       
  Fly   651 GSDSSCSESV--GGSTGGAFR---------PTSTGSPKEAVGAAAAAAAAGLNPGGGS------- 697

Zfish   358 VPDTDSSSKPSSAPEFSL-----------PPHPSAGHQEYA-----------GVL---NMAITQA 397
            .|..:.|..|...|...|           |||....|...|           |:|   .:|:...
  Fly   698 YPSPNISVGPPIHPSPHLLPYLYPHGLYPPPHLGLLHNPAAAAAMSPAGLNPGLLFNAQLALAAQ 762

Zfish   398 KPGMLG----------THPL-------YSHYSTEQSLGQ-------WSGAAASQYPP-------- 430
            .|.:.|          ..||       :|.||...|||.       .|.|..|..||        
  Fly   763 HPALFGHAYAAAGHTPVSPLQGLKSHRFSPYSLPGSLGSAFDAVTPGSNANRSGDPPGGGGGGLG 827

Zfish   431 ----------------PPPPHHHLPT 440
                            |.|..|..||
  Fly   828 GGVVENGPRSLSSSPRPRPASHSPPT 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbx16NP_571133.1 TBOX 30..217 CDD:238106 110/189 (58%)
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 9/43 (21%)
T-box 330..513 CDD:279278 107/182 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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