DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbx16l and bi

DIOPT Version :9

Sequence 1:XP_017211524.1 Gene:tbx16l / 30254 ZFINID:ZDB-GENE-980526-171 Length:492 Species:Danio rerio
Sequence 2:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster


Alignment Length:579 Identity:168/579 - (29%)
Similarity:246/579 - (42%) Gaps:190/579 - (32%)


- Green bases have known domain annotations that are detailed below.


Zfish    51 VSLQDRELWDKFSSIGTEMLITKSGRRMFPSCKVTVTGLNPKVKYVVIMDMVPFDNHKYKWNKDC 115
            |:|:.::||:||..:||||:||||||:|||..|..|:||:.|.||::::|:|..|:::||::...
  Fly   330 VTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNSR 394

Zfish   116 WEVNGSSDPHLPNRFFIHPDSPAPGQKWMQYPISFHKLKLTNNTLNSNGLV---VLHSMHKYQPR 177
            |.|.|.:||.:|.|.:||||||..|::|||..:||||||||||..:.:|.|   :|:||||||||
  Fly   395 WMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPR 459

Zfish   178 LHIVQSPDPC-TPHNPGAYLRFTFPEAAFIAVTAYQNQEITKLKIDNNPFAKGFRDNGLNRKR-- 239
            .|:|::.|.. .|::  .:..:.|.|..|||||||||::||:||||||||||||||.|..::.  
  Fly   460 FHLVRANDILKLPYS--TFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKREKK 522

Zfish   240 ---FRDKGT-----------------------------------QEMQDTDRQVKLDLT------ 260
               ..::|:                                   ...||.|.:: ||:.      
  Fly   523 QALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKL-LDVVGPPQSP 586

Zfish   261 ---------------------------------ANECGIISTAGMS-------QMVEDVDV---- 281
                                             |:|....:.|..|       ::..|.||    
  Fly   587 LLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAAAAAANASAEDALRRRLQADADVERDG 651

Zfish   282 ---SVSSSVD------CRDTQNSS------------SVSLNPFISAFTNPSSAGGAAAHQTHTLL 325
               |.|.||.      .|.|...|            :..|||...::.:|:.:.|...|.:..||
  Fly   652 SDSSCSESVGGSTGGAFRPTSTGSPKEAVGAAAAAAAAGLNPGGGSYPSPNISVGPPIHPSPHLL 716

Zfish   326 SLSNRH--FSSPRESNLNSVCAALPVSQLSTGHTSFSRLNPQETHHNSRPKIQLQPPHPSLQCHD 388
            .....|  :..|....|::..||..:|.        :.|||....:   .::.|...||:|..| 
  Fly   717 PYLYPHGLYPPPHLGLLHNPAAAAAMSP--------AGLNPGLLFN---AQLALAAQHPALFGH- 769

Zfish   389 LELRLPLPPKLSRVQLSESALRNLEMSPL----SDCANPRPLTNILNRSCFRASTP--------- 440
                            :.:|..:..:|||    |...:|..|...|. |.|.|.||         
  Fly   770 ----------------AYAAAGHTPVSPLQGLKSHRFSPYSLPGSLG-SAFDAVTPGSNANRSGD 817

Zfish   441 ---------SGKLLPNPPQPEQFLRGSEREIYPAVQEYTDQQFTLNSQTEHRPHMRPLT 490
                     .|.::.|.|:.   |..|.|. .||               .|.|..||::
  Fly   818 PPGGGGGGLGGGVVENGPRS---LSSSPRP-RPA---------------SHSPPTRPIS 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbx16lXP_017211524.1 None
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988
T-box 330..513 CDD:279278 98/184 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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