DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbx2b and Doc1

DIOPT Version :9

Sequence 1:NP_571126.1 Gene:tbx2b / 30253 ZFINID:ZDB-GENE-990726-27 Length:687 Species:Danio rerio
Sequence 2:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster


Alignment Length:525 Identity:164/525 - (31%)
Similarity:231/525 - (44%) Gaps:187/525 - (35%)


- Green bases have known domain annotations that are detailed below.


Zfish    73 HQAAHLRSLKSLEPEEEVEDDPKVTLEAKDLWDQFHKLGTEMVITKSGRRMFPPFKVRINGLDKK 137
            ||..|:     :.|........:..||..|||.||||:||||:||||||||||..:|.::||:::
  Fly    43 HQQPHM-----MLPSRPTLPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEE 102

Zfish   138 AKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN 202
            |.|.:|:::|...||||||..|:|:.||.|:|:.|:|||:||||||||..|.::.:.|:|:||||
  Fly   103 ASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTN 167

Zfish   203 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDN 267
            |..|..|..:|.||||||||.||:|::::.:||::..:.:|||||:|:||||||||:||:|||||
  Fly   168 NTLDSSGHIVLASMHKYQPRLHIIRSSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDN 232

Zfish   268 NPFAKGFRDTGNGRREKRKQLTLPSLRMYEDQCKVDRDGADSDASSSEPTTGRDAGHSPGPVSSP 332
            ||||||||::|..|                  ||...:.:.:....||                 
  Fly   233 NPFAKGFRESGQSR------------------CKRKLNSSGNSTLESE----------------- 262

Zfish   333 LRFNRGSRDDKTCTDSEHEMDHQNDRCGGSSSPAPKPSSPFRSRSEDWGREKPIAEKKDDYPDSR 397
                    ||                 |.|.|....|.:                          
  Fly   263 --------DD-----------------GSSVSSCDSPQA-------------------------- 276

Zfish   398 KTSDSIFSIRNLEKDKLESRSRKDTDSSKKDTENSGISGSKDSFSPLMVQTESPSHFGAGHLQSL 462
                              .|.|:|.:.     :::|              :.||:::||.|    
  Fly   277 ------------------KRQRQDFEQ-----DSTG--------------SVSPAYYGATH---- 300

Zfish   463 ALSGLHSQQFFNPLNTGQPLLFHPGQFAMAPGAFSAMGMGHLLASVSGAGGLENGSLSAQGTGST 527
                    ...||::   |.|.|                 ||....|||.||. .|::|...|..
  Fly   301 --------PVANPMS---PYLRH-----------------HLSYGPSGAAGLP-PSIAAAYFGGV 336

Zfish   528 PSPFPFHLSQHMLASQGIPMPTFGGLFPYPYTYMAAAAAAASALPASSST-------ASSLSRNP 585
            |             .|.:|||      |..|....|..:..::.|..|||       ::|..||.
  Fly   337 P-------------PQILPMP------PATYAPTVAPVSPVASQPVGSSTPTTSPRPSTSTKRNS 382

Zfish   586 FLSSS 590
            |..|:
  Fly   383 FSISA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbx2bNP_571126.1 TBOX 95..278 CDD:238106 107/182 (59%)
TBX 294..361 CDD:204975 6/66 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..452 13/148 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..687
Doc1NP_648283.1 TBOX 58..245 CDD:238106 108/186 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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