DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbx2b and org-1

DIOPT Version :9

Sequence 1:NP_571126.1 Gene:tbx2b / 30253 ZFINID:ZDB-GENE-990726-27 Length:687 Species:Danio rerio
Sequence 2:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster


Alignment Length:586 Identity:189/586 - (32%)
Similarity:263/586 - (44%) Gaps:161/586 - (27%)


- Green bases have known domain annotations that are detailed below.


Zfish    55 HTLAGAAEAGLHPALSHHHQAAHLRSLKSLEPEEEVEDDPKVTLEAKDLWDQFHKLGTEMVITKS 119
            |.::......:||:|:   ||.                   |.||.|.||||||..||||:|||:
  Fly   179 HNISKGESEPVHPSLA---QAI-------------------VVLETKALWDQFHAQGTEMIITKT 221

Zfish   120 GRRMFPPFKVRINGLDKKAKYILLMDIVAADDCRYK--FHNSRWMVAGKADPEMPKRMYIHPDSP 182
            ||||||.|:|||.|||..|.||.:||.|..||.||:  ||||.|:|||||||..|.|:::|||||
  Fly   222 GRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSP 286

Zfish   183 ATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLP-----------Y 236
            |.|..||.:.|:|.|||||||..|::|..||||||:||||||:|      .||           .
  Fly   287 AVGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFHLV------YLPPKNASLDENEHS 345

Zfish   237 STFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRD-------TGNG-------------- 280
            |.|||::||||.|.|||||||.::|||||.:|||||||||       ||.|              
  Fly   346 SHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARM 410

Zfish   281 ----RREKRKQLTLPSLRMYEDQCKVDRDGADSDASSSEPTTGRDAGHSPGPVSSPLRFNRGSRD 341
                ::::::|..|...:..:.|.| :|..|.|:...|                           
  Fly   411 KQQQQQQQQQQQQLQQQQQQQQQLK-ERTAATSNFGLS--------------------------- 447

Zfish   342 DKTCTD-SEHEMDHQNDRCGGSSSPAPKPSSPFRSRSED---WGREKPIAEKKDDYPDSRKTSDS 402
               |:: :..:...|..:.|....||...||.....|.|   :..|:.:.::.......:..|  
  Fly   448 ---CSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNSPDLLGYQMEQQLQQQHQQQQQQQHQS-- 507

Zfish   403 IFSIRNLEKDKLESRSRKDTDSSKKDTENSGISGSKDSFSPLMVQTESPSHFGAGHLQSLALSGL 467
                   ::..|..:.:.:...|                  |:.|:::.:.:|:.|         
  Fly   508 -------QQQHLHQQHQANQQQS------------------LLQQSQNHTQYGSYH--------- 538

Zfish   468 HSQQFFNPLNTGQPLLFHPGQFAMAPGAFSAMGMGHLLASVSGAGGLENGSLSAQGTGSTPSPFP 532
            |:.|   ......||..|....| :|.|.:|.|.....|:|:|..|       |.|.|...|...
  Fly   539 HAYQ---AQVQSHPLTPHSSSSA-SPPATAAPGASAATAAVAGGAG-------AAGAGGATSATQ 592

Zfish   533 FHLSQHMLASQGIP----MPTFGGLFPYPYTYMAAAAAAA-----SALPASSSTASSLSRNPFLS 588
            ...:.::.:|.|.|    ...||.:    |.:.|||||||     .|...:.|.|.:.:..|:.|
  Fly   593 VMSAANIYSSIGQPYAQEQSNFGAI----YHHNAAAAAAAHYHHGHAHGHAHSHAHAHAHGPYAS 653

Zfish   589 S 589
            :
  Fly   654 A 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbx2bNP_571126.1 TBOX 95..278 CDD:238106 119/202 (59%)
TBX 294..361 CDD:204975 8/67 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..452 19/152 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..687
org-1NP_001285019.1 TBOX 195..389 CDD:238106 121/218 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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