Sequence 1: | NP_001315307.1 | Gene: | sema3h / 30252 | ZFINID: | ZDB-GENE-990715-8 | Length: | 749 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
Alignment Length: | 665 | Identity: | 186/665 - (27%) |
---|---|---|---|
Similarity: | 308/665 - (46%) | Gaps: | 133/665 - (20%) |
- Green bases have known domain annotations that are detailed below.
Zfish 1 MLALFCLMLLAAPLTDAWKSS-QPRLHFQ-----------HSELMRSGRLVSLSMPAGDLNSLLP 53
Zfish 54 DEDGRRLYIGMKDHLLSTSLDDITQNPRKIYWPANPDRIQDCTMAGKTLEMDCANFLRVLERYNQ 118
Zfish 119 THLYACGTGAFNPRCAFIPTNLFLRAEEQ-TLQDEDTESGRGKCPFDPHQRTATAIIDGELYAGI 182
Zfish 183 SSDFLSHDTAFIRSLGERHVIRTEQYDSTWLQGAEFVHVTAMSESDNEEDDKVYVFFTERAQEAE 247
Zfish 248 GAAGKVLYSRVARVCKNDIGGQRSLVNKWSTFQKARIVCSVPGPDGIQTHFDKLQD----IFIQH 308
Zfish 309 GRDKKNPLVYGLFTTTSNVLNGSAVCVYRMQDIIRAFKGNFLHREG-HQYKLTEYTGRVPYPRPG 372
Zfish 373 TCPSSTYGGFRSTREYPDDVIFFSRTHPLMQEVVRPLGGQPLLIRVGVPYKLTRLLVD-RVEAVD 436
Zfish 437 GQ-HDVMFIGTDSGLVLKVLHFPKANRQNQ--EVTLEQLQVFKHKSAITAMTLSKKKQW------ 492
Zfish 493 ------LFAGSAEGVVQLGLFQC--DLYGQACAECCLARDPYCTWD-------GHSCSQFM---- 538
Zfish 539 -------------PTGR--------------RRNI-----RQVNDDGNPLNQCVRQGAGLQVEAE 571
Zfish 572 -------EKTLVVAV 579 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sema3h | NP_001315307.1 | Sema_3 | 39..509 | CDD:200500 | 153/491 (31%) |
PSI | 508..>544 | CDD:214655 | 14/75 (19%) | ||
Ig_Semaphorin_C | 570..661 | CDD:143180 | 6/17 (35%) | ||
IG_like | 573..658 | CDD:214653 | 5/7 (71%) | ||
Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 154/500 (31%) |
PSI | 545..>579 | CDD:214655 | 12/34 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D153798at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.920 |