Sequence 1: | NP_571123.2 | Gene: | sema3d / 30250 | ZFINID: | ZDB-GENE-990715-2 | Length: | 764 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
Alignment Length: | 615 | Identity: | 194/615 - (31%) |
---|---|---|---|
Similarity: | 308/615 - (50%) | Gaps: | 112/615 - (18%) |
- Green bases have known domain annotations that are detailed below.
Zfish 26 WSTSVMLFFSLPEGN--CMKESL-PR--VKLGYKDLIHSRSVVPFTGS-SEGQHFQTVLLDEERS 84
Zfish 85 RLLLGAKDHVYLLDPDNINKH----PKKLSWPASRDRVEMCILAGKNPLTECANFIRVLHSYNRT 145
Zfish 146 HVYACGTGAFHPTCAFLEIKGHKEDRWLQLHSN-TME---SGRMKCPFDPNQPFASVLTDQYLYA 206
Zfish 207 GTASDFLGKDSTFTRSLGPPPHQQYIRTDISEDYWINEGKFISAHPISDTYNPDDDKIYFFFREA 271
Zfish 272 SRDGSTTDKSVLSRVARICRNDVGGLRSLTNKWTTFLKARLVCSIPGPDGVDTHFDELQDIFLL- 335
Zfish 336 ----PSRDEKNPMVYGVFTTTSSIFKGSAVCVYTMEDIRAAFNGPYAHKEGPDHRWVEY-EGRIP 395
Zfish 396 YPRPGTCPSRTYDPHIKTTKDFPDEVISFIRLHPLMYQSVHPMTGRPIFTRINTEYRLTQIIVD- 459
Zfish 460 RVAAEDGQ-YAVMFLGTDMGSVLKVVSITQENWSSEE----IILEELQVFKNPSPILNMEVSSKQ 519
Zfish 520 Q------------QLFVGGSDGLVQVSLHRCH---IYGQGCAECCLARDPYCAWDGTQCSRYIPA 569
Zfish 570 SKRRARRQDIKHGDPSSHCWDTEDVLGRNV 599 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sema3d | NP_571123.2 | Sema_3D | 65..538 | CDD:200513 | 158/505 (31%) |
PSI | 537..589 | CDD:214655 | 20/54 (37%) | ||
Ig_Semaphorin_classIII | 599..689 | CDD:143279 | 1/1 (100%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 743..764 | ||||
Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 156/501 (31%) |
PSI | 545..>579 | CDD:214655 | 18/48 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D153798at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.020 |