DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mbnl3 and mbl

DIOPT Version :9

Sequence 1:XP_038955534.1 Gene:Mbnl3 / 302492 RGDID:1565834 Length:381 Species:Rattus norvegicus
Sequence 2:NP_001261046.1 Gene:mbl / 36945 FlyBaseID:FBgn0265487 Length:956 Species:Drosophila melanogaster


Alignment Length:344 Identity:147/344 - (42%)
Similarity:189/344 - (54%) Gaps:78/344 - (22%)


- Green bases have known domain annotations that are detailed below.


  Rat    10 RDTKWLTLEVCREFQRGTCSRADTECRFAHPPRVCHVENGRVVACYDSLKGRCTREN--CKYLHP 72
            :|::||.|||||||||..|||.||||:|||||....|:||:|.|||||:||||.|:.  |||.||
  Fly    14 KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACYDSIKGRCNRDKPPCKYFHP 78

  Rat    73 PPHLKSQLEINGRNNLIQQKTAAAMFAQQMQLMLQNAQMSSLASFPMNPSLAAN-PTMAFNPYI- 135
            |.|||.||.|||||:                |.|:||.|..:...|..|.::.. |.:|.|||: 
  Fly    79 PQHLKDQLLINGRNH----------------LALKNALMQQMGIAPGQPVISGQVPAVATNPYLT 127

  Rat   136 --------PHPGMG-LVPAELLPN------GPVLISGNPPLALSGVPGPKPPRTDRLEVCREFQR 185
                    |:...| ||||.|.|:      |||:     |..:. |...|.||:|||||||||.|
  Fly   128 GIPANSYSPYYTTGHLVPALLGPDPVTSQLGPVV-----PQTVQ-VAQQKIPRSDRLEVCREFLR 186

  Rat   186 GNCTRGESECRYAHPTDVSMIEVTDNTVTICMDYIKGRCSREKCKYFHPPPHLQAKLRAAHHQMN 250
            |.|.|.|||||:|||.: |:....|.::|:|||.:||||:|:.|:|||||.||||:|:||..:..
  Fly   187 GACKRAESECRFAHPQE-SVARHDDGSITVCMDAVKGRCARDPCRYFHPPLHLQAQLKAAQTRAT 250

  Rat   251 HSAAANAMAL----------PPGALQ----------------LIP-KRSALDKVNGATPVFNPSV 288
            ..|||.|:.|          |...:.                ::| ||.|.:|  ...||:.|. 
  Fly   251 AVAAAAAVWLYTIYFSILFEPSLCMDVKTVGSFYYDNFQFSGMVPFKRPAAEK--SGIPVYQPG- 312

  Rat   289 FHCQQALANMQIPQPAFIP 307
                 |.|..|:.|| ::|
  Fly   313 -----ATAYQQLMQP-YVP 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mbnl3XP_038955534.1 ZnF_C3H1 18..41 CDD:214632 18/22 (82%)
ZnF_C3H1 176..200 CDD:214632 18/23 (78%)
mblNP_001261046.1 ZnF_C3H1 175..201 CDD:214632 19/25 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341326
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2494
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H23101
Inparanoid 1 1.050 146 1.000 Inparanoid score I4325
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001679
OrthoInspector 1 1.000 - - otm45060
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12675
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1238
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.850

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