DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spon2a and mspo

DIOPT Version :9

Sequence 1:NP_571082.1 Gene:spon2a / 30201 ZFINID:ZDB-GENE-990415-160 Length:334 Species:Danio rerio
Sequence 2:NP_001286427.1 Gene:mspo / 36632 FlyBaseID:FBgn0020269 Length:601 Species:Drosophila melanogaster


Alignment Length:481 Identity:133/481 - (27%)
Similarity:175/481 - (36%) Gaps:183/481 - (38%)


- Green bases have known domain annotations that are detailed below.


Zfish    36 TECSARGPASYIVVFTGHWSPQTFPKQYPLFRPPAQWSKLMVVTHNEQYRLWQEGAPASDGMKSF 100
            |.|:....|.|.||...:|:.:.|||.||.:||.|||:|.:..|||..|.|:..|.||:..:|.|
  Fly   112 TGCTLDRLAVYKVVLHTYWTRELFPKHYPDWRPTAQWTKTLGRTHNANYALYHIGQPATAAVKQF 176

Zfish   101 AEQGLTVDLVKDAKEARK----------------------------------------------- 118
            ||.|.|..|..:|.|.::                                               
  Fly   177 AESGRTDLLDSNAGEQQQVQMQLQSQMQAGKSPSGGISSGTTSFNATAASTATPTGGSGGSGGSG 241

Zfish   119 ----------RRSVGSMYRTAGIPSGIGHSSTEVLLTPRSPLVSLIVKLIPSPDWFVGVDGLNLC 173
                      .|||...:....||.|.|.|..:|.:.....||||:.:::||||||:|||...||
  Fly   242 GSGGTGTTTAERSVFDEFSMPAIPMGAGRSEAKVFVDSNHSLVSLMTRIVPSPDWFIGVDSFELC 306

Zfish   174 EGGKWKQEVTFDLHPFDAGTDSGFTFSSPNFPTTPPENITMITSQKPNHPANSFYYPRLNELPPL 238
            .||.|...||.:|.|.|||||:||||::||:||.|...|..|||:.|.|||.|||||:...|||:
  Fly   307 VGGSWIDTVTVELDPLDAGTDNGFTFTAPNWPTEPQGVIYRITSRYPGHPAGSFYYPKSKRLPPI 371

Zfish   239 ATI-WVK------------------------------------------------RQSRLPVRQQ 254
            ||. ::|                                                ||:.....||
  Fly   372 ATFQFIKLKEYELSEVFNIAEDDRKYETVQTQTHLDAEHNHVEMNNELSASIERERQTEQQQLQQ 436

Zfish   255 N-----RLSNHIL-------------------------------------------PDASKPHRF 271
            |     |:.:.:|                                           .|||..:..
  Fly   437 NDDERQRIRSQLLAKMNPIYGSNNSLQPAPGQVVSVVPKNDKHAILQSIASSYRRAADASDANAS 501

Zfish   272 SETP---------------------------LDCEVSMWSSWGLCFGPCARGGLRHRTRYILLKP 309
            ..||                           .||.||.||.|..|...|..|.: ||.|.::...
  Fly   502 KPTPSAIGGGKAGGAVGGGAATRRRSSAQRRRDCRVSHWSEWTACSKSCGVGEM-HRYRKVIKHG 565

Zfish   310 ANSGSPCPELEEQEEC-TPHNCLADQ 334
            ...|..||.|::.:.| |..||...|
  Fly   566 KRGGRQCPALQQSKWCGTERNCHGSQ 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spon2aNP_571082.1 Spond_N 44..230 CDD:283999 89/242 (37%)
TSP1 283..330 CDD:214559 15/47 (32%)
mspoNP_001286427.1 Spond_N 120..363 CDD:283999 89/242 (37%)
TSP1 537..588 CDD:214559 18/51 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574751
Domainoid 1 1.000 161 1.000 Domainoid score I3988
eggNOG 1 0.900 - - E1_KOG3539
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I3971
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D240419at33208
OrthoFinder 1 1.000 - - FOG0007149
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11311
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5251
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.860

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