DRSC/TRiP Functional Genomics Resources

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Protein Alignment egr2b and sr

DIOPT Version :9

Sequence 1:NP_571072.2 Gene:egr2b / 30190 ZFINID:ZDB-GENE-980526-283 Length:412 Species:Danio rerio
Sequence 2:NP_001262693.1 Gene:sr / 42162 FlyBaseID:FBgn0003499 Length:1271 Species:Drosophila melanogaster


Alignment Length:451 Identity:151/451 - (33%)
Similarity:192/451 - (42%) Gaps:136/451 - (30%)


- Green bases have known domain annotations that are detailed below.


Zfish    47 HYE---------QINAGDGLINGDMSTEKRALDLAYSSSFA------------QPAGPRNQTFTY 90
            ||:         |..|......|..:|...|::.|.:::.|            |...|..|....
  Fly   698 HYQQHAIQHQQSQQQASKISYRGIFTTTGNAMNAAAAAAAAAAQQQHQQQQQHQQQLPSPQLGVL 762

Zfish    91 MGKFSIDSQYPGN-WNPEGVINIVSAGILGMTQPSSASSSPASSVSPSHFSSTLSCTMAQNQADM 154
            .|..|..|...|| |              |:..|......|.....|:|::     ||.|.|...
  Fly   763 AGPMSPPSNSLGNSW--------------GLPSPDKTMFQPPLFSLPAHYA-----TMQQQQQQQ 808

Zfish   155 EH----------IYSPPPPY----SGCGEVYQDPSAFLSTSTCP---ISYPPPSYSSPKPNADSG 202
            :.          ..:.|.||    :......|.......|..|.   :..|||||:    .|.:|
  Fly   809 QQQQQQQQQQQAAGAAPSPYDDGRAAAAAAAQHAELLGLTMDCTPLLLKQPPPSYA----GASAG 869

Zfish   203 LFPIIPDYAGFFQPPCQRD--MQSMPDRKPFSCPLD-------------------SFKLPPPLTP 246
             ||.:.|.....:...|:.  ::|.|..:....|.|                   :..||.|.:.
  Fly   870 -FPGLGDLHSSHEQQLQQQQYVRSQPKYQWLDSPADYAQQQQQVQQVQQQQQQQQTLVLPGPTSS 933

Zfish   247 LNTIRNFTLGGPVPDGPRLP-----------------------------------TAYTP----- 271
            .:: .|..||..:|.....|                                   ..|:|     
  Fly   934 ASS-SNAALGVLIPKQENYPDMQPSSNGTGYSGGSGGSSAAAAAAAAAAAAAVQLAEYSPSTSKG 997

Zfish   272 ----------QNLPLRPI-LRPRKYPNRPSKTPVHERPYPCPAEGCDRRFSRSDELTRHIRIHTG 325
                      ..:||:.: ::||||||||||||||||||.||.|.||||||||||||||||||||
  Fly   998 HEILSQVYQQSTVPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTG 1062

Zfish   326 HKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDFCGRKFARSDERKRHTKIHLRQKERK 386
            .||||||||||:||||||||||||||||||||:||.||||||||||:|||.|:||:|:.:|
  Fly  1063 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDICGRKFARSDEKKRHAKVHLKQRIKK 1123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egr2bNP_571072.2 DUF3446 92..164 CDD:288757 16/82 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..299 20/45 (44%)
COG5048 295..>357 CDD:227381 56/61 (92%)
zf-C2H2 299..323 CDD:278523 20/23 (87%)
C2H2 Zn finger 301..323 CDD:275368 19/21 (90%)
zf-H2C2_2 315..340 CDD:290200 22/24 (92%)
COG5048 327..>411 CDD:227381 50/60 (83%)
C2H2 Zn finger 331..351 CDD:275368 18/19 (95%)
zf-H2C2_2 343..368 CDD:290200 22/24 (92%)
C2H2 Zn finger 359..379 CDD:275368 16/19 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..412 9/16 (56%)
srNP_001262693.1 zf-C2H2 1036..1060 CDD:278523 20/23 (87%)
C2H2 Zn finger 1038..1060 CDD:275368 19/21 (90%)
zf-H2C2_2 1052..1077 CDD:290200 22/24 (92%)
C2H2 Zn finger 1068..1088 CDD:275368 18/19 (95%)
zf-H2C2_2 1080..1105 CDD:290200 22/24 (92%)
C2H2 Zn finger 1096..1116 CDD:275368 16/19 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000710
OrthoInspector 1 1.000 - - otm24421
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
66.590

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