DRSC/TRiP Functional Genomics Resources

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Protein Alignment egr2b and cbt

DIOPT Version :9

Sequence 1:NP_571072.2 Gene:egr2b / 30190 ZFINID:ZDB-GENE-980526-283 Length:412 Species:Danio rerio
Sequence 2:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster


Alignment Length:283 Identity:81/283 - (28%)
Similarity:115/283 - (40%) Gaps:69/283 - (24%)


- Green bases have known domain annotations that are detailed below.


Zfish   172 QDPSAFLSTSTCPISYPPPSYSSPKPNADSGLFPIIPDYAGFFQPPCQRDMQSMPDRKPFSCPLD 236
            ||.::..|||.|       |.||....:.|.:.|.:.|  .:.:....|:::...:||..:    
  Fly   118 QDENSSSSTSCC-------SSSSNTNTSTSSVPPTVED--DYPEANVWRNLKFKMNRKRAA---- 169

Zfish   237 SFKLPPPLTPLNTIRNFTLGGPVPDGPRLPTAYTPQNLPLRPILRP------------------- 282
            ...|||..||...:....    .|..|    |...:...::|||.|                   
  Fly   170 EVALPPVQTPETPVAKLV----TPPAP----AECIKEEEIKPILTPIYVSPVASSASQLILLSTV 226

Zfish   283 --RKYPNRPSKTP------------------VHERPYPCPAEGCDRRFSRSDELTRHIRIHTGHK 327
              ::.|....|||                  ...|.|.|....|.:.:.:|..|..|.|:|||.:
  Fly   227 AAQQSPTPVPKTPTMSEEKLTTRITAAQAAATRSRIYECSFPDCGKNYFKSSHLKAHQRVHTGER 291

Zfish   328 PFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDFCGRKFARSDERKRHTKIHLRQK----ERK 386
            ||.|:  .|.:.|||||.|:.|.|||||||.|.|..|.:||.|||...:|.|.|.:.|    .|.
  Fly   292 PFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHNKDKANGVNRH 356

Zfish   387 SSSSSTGVSSSERGVATSICSSS 409
            .|.::...|:|   ||.|:|.:|
  Fly   357 VSLANNNTSAS---VAASLCDAS 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egr2bNP_571072.2 DUF3446 92..164 CDD:288757
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..299 9/68 (13%)
COG5048 295..>357 CDD:227381 29/63 (46%)
zf-C2H2 299..323 CDD:278523 7/23 (30%)
C2H2 Zn finger 301..323 CDD:275368 6/21 (29%)
zf-H2C2_2 315..340 CDD:290200 11/26 (42%)
COG5048 327..>411 CDD:227381 39/89 (44%)
C2H2 Zn finger 331..351 CDD:275368 10/21 (48%)
zf-H2C2_2 343..368 CDD:290200 14/24 (58%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..412 13/43 (30%)
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 7/23 (30%)
C2H2 Zn finger 265..287 CDD:275368 6/21 (29%)
COG5048 <270..362 CDD:227381 40/91 (44%)
zf-H2C2_2 279..306 CDD:290200 11/26 (42%)
C2H2 Zn finger 295..317 CDD:275368 10/21 (48%)
zf-H2C2_2 309..332 CDD:290200 12/22 (55%)
zf-C2H2 323..345 CDD:278523 10/21 (48%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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