DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dld and Dl

DIOPT Version :9

Sequence 1:NP_571030.2 Gene:dld / 30138 ZFINID:ZDB-GENE-990415-47 Length:717 Species:Danio rerio
Sequence 2:NP_001247193.1 Gene:Dl / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster


Alignment Length:662 Identity:268/662 - (40%)
Similarity:366/662 - (55%) Gaps:93/662 - (14%)


- Green bases have known domain annotations that are detailed below.


Zfish     4 LMIAVLLCVMISQGFCSGVFELKLQEFLNKKGVTGNANCCKGSA--AEGLQC--ECKTFFRICLK 64
            |:.|.:...:|.|...||.|||:|:.|.|..|......||.|.:  |.| :|  .|||.||:|||
  Fly     7 LLTAFICFTVIVQVHSSGSFELRLKYFSNDHGRDNEGRCCSGESDGATG-KCLGSCKTRFRVCLK 70

Zfish    65 HYQANVSPDPPCTYGGAVTPVLGSNSFQVPES--FPDSSFTNPIPFAFGFTWPGTFSLIIEALHT 127
            ||||.:.....||||..:||:||.||..:.::  |.:..|||||.|.|.|:||||||||:||.| 
  Fly    71 HYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSFSWPGTFSLIVEAWH- 134

Zfish   128 DSTDDLSTENPDRLISRMTTQRHLTVGEEWSQDLQVGGRTELKYSYRFVCDEHYYGEGCSVFCRP 192
            |:.:..:......||.|:..|:.|.|..||..:......|.|:|.:|..||.:|||.||:.||||
  Fly   135 DTNNSGNARTNKLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRVTCDLNYYGSGCAKFCRP 199

Zfish   193 RDDTFGHFTCGERGEIICNSGWKGQYCTEPICLPGCDEDHGFCDKPGECKCRVGFSGKYCDDCIR 257
            |||:|||.||.|.|||||.:||:|.||..|.|..||  :||.||||.:|.|::|:.|..|::|:.
  Fly   200 RDDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGC--EHGHCDKPNQCVCQLGWKGALCNECVL 262

Zfish   258 YPGCLHGTCQQPWQCNCQEGWGGLFCNQDLNYCTHHKPCQNGATCTNTGQGSYTCSCRPGFTGDS 322
            .|.|:||||.:||.|.|.||||||:|||||||||:|:||:||.||.|||:|.|||.|.||::||.
  Fly   263 EPNCIHGTCNKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKCAPGYSGDD 327

Zfish   323 CEIEVNECSG--SPCRNGGSCTDLENT---YSCTCPPGFYGRNCELSAMTCADGPCFNGGQCADN 382
            ||.|:..|..  :||:|||:|.|..:|   |.|.|..|:.|:.||...:||:|.|| :.|.|.:.
  Fly   328 CENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPC-HQGICRNV 391

Zfish   383 PEG------GYFCQCPMGYAGFNCEKKIDHCSSNP------------------------------ 411
            ..|      ||.|:||:||:|.||:.::|:||.||                              
  Fly   392 RPGLGSKGQGYQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQPSGKCICPAGFSGTRCETNIDD 456

Zfish   412 -----CSNDAQCLDLVDSYLCQCPEGFTGTHCEDNIDECATYPCQNGGTCQDGLSDYTCTCPPGY 471
                 |.|...|:|:|:.|.|||..||.||||...:|.|...||.|||||.:..:||.|||..|:
  Fly   457 CLGHQCENGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQCTCRAGF 521

Zfish   472 TGKNCTSAVNKCLHNPCHNGATCHEMDGRYVCACIPGYGGRNCQFLLPENPQGQAIVEGADKRYS 536
            |||:|:..:::|...|||||.||......:.|.|..|:.|:.|.             |.:....:
  Fly   522 TGKDCSVDIDECSSGPCHNGGTCMNRVNSFECVCANGFRGKQCD-------------EESYDSVT 573

Zfish   537 YEEDDGGFPWTAVCAGIILVLLVLIGGSVF-------------VIYIRLKLQQRSQQID------ 582
            ::....|....|...|:....:|||  :||             |::...:.::|:|:.|      
  Fly   574 FDAHQYGATTQARADGLTNAQVVLI--AVFSVAMPLVAVIAACVVFCMKRKRKRAQEKDDAEARK 636

Zfish   583 --SHSEIETMNN 592
              ..:.:.||::
  Fly   637 QNEQNAVATMHH 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dldNP_571030.2 MNNL 20..90 CDD:284966 35/73 (48%)
DSL 157..219 CDD:128366 33/61 (54%)
EGF_CA 286..324 CDD:238011 25/37 (68%)
EGF_CA 327..362 CDD:238011 14/39 (36%)
EGF_CA <371..401 CDD:238011 14/35 (40%)
EGF_CA 404..439 CDD:238011 19/69 (28%)
EGF_CA 441..477 CDD:238011 18/35 (51%)
EGF_CA 480..515 CDD:238011 12/34 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 649..693
DlNP_001247193.1 MNNL 23..96 CDD:284966 35/73 (48%)
DSL 164..226 CDD:279722 33/61 (54%)
EGF_CA 291..329 CDD:238011 25/37 (68%)
EGF_CA 337..372 CDD:238011 13/34 (38%)
EGF_CA 453..488 CDD:238011 13/34 (38%)
EGF_CA 492..526 CDD:238011 18/33 (55%)
EGF_CA 529..564 CDD:238011 12/34 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578036
Domainoid 1 1.000 113 1.000 Domainoid score I6084
eggNOG 1 0.900 - - E33208_3BEE5
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4104
Inparanoid 1 1.050 563 1.000 Inparanoid score I1046
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D197806at33208
OrthoFinder 1 1.000 - - FOG0002026
OrthoInspector 1 1.000 - - otm24566
orthoMCL 1 0.900 - - OOG6_104568
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4539
SonicParanoid 1 1.000 - - X1332
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.690

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