DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt2a and dsx

DIOPT Version :9

Sequence 1:NP_571027.1 Gene:dmrt2a / 30129 ZFINID:ZDB-GENE-990621-7 Length:507 Species:Danio rerio
Sequence 2:NP_001262353.1 Gene:dsx / 40940 FlyBaseID:FBgn0000504 Length:572 Species:Drosophila melanogaster


Alignment Length:475 Identity:106/475 - (22%)
Similarity:158/475 - (33%) Gaps:171/475 - (36%)


- Green bases have known domain annotations that are detailed below.


Zfish    33 DTGSKDDDKSDRLN-------LGSGDQRKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANC 90
            ||.| |.|..|..|       ..||........|.||||||||:...||||||:|::|.|.|..|
  Fly    10 DTMS-DSDMIDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKC 73

Zfish    91 LLVVERQRVMAAQVALRRQQATEDKKGITGKQIPVERRNIYQRHIRPSTMLAKSILEGYRPVQND 155
            .|..:||||||.|.||||.||.:            |:|.::...:.|:...|.::|..:..|   
  Fly    74 RLTADRQRVMALQTALRRAQAQD------------EQRALHMHEVPPANPAATTLLSHHHHV--- 123

Zfish   156 PFLGANPALPPPLSDRMRKRRAFADKELETIMLEREYKERELLESTQSNSASLFMPGSMVHAAEY 220
                |.||                            :.....:.:..::.......|.::|    
  Fly   124 ----AAPA----------------------------HVHAHHVHAHHAHGGHHSHHGHVLH---- 152

Zfish   221 NSYKTAFSSASAPSTVEPSPKDLCGFLPGCLDLSLQYAATGGTTANVEL------------ISSN 273
             ..:.|.::|:|||    :|....|               |.:||...:            .::.
  Fly   153 -HQQAAAAAAAAPS----APASHLG---------------GSSTAASSIHGHAHAHHVHMAAAAA 197

Zfish   274 VSVA---------------TTYRQYPLSPRFVMWPRGSSSISDALLYQQCLLNATAVQNLKPGAV 323
            .|||               ..:.|:|                    :||                
  Fly   198 ASVAQHQHQSHPHSHHHHHQNHHQHP--------------------HQQ---------------- 226

Zfish   324 WDPKMMSSTESHPPEQD-----APASRLEGSRVAPESSDLQPGPR---EAQTGLGHNGGARSAFS 380
              |...::..| ||..|     .||:...|.. ||.||:......   .:..|.|..||:....:
  Fly   227 --PATQTALRS-PPHSDHGGSVGPATSSSGGG-APSSSNAAAATSSNGSSGGGGGGGGGSSGGGA 287

Zfish   381 PPKRTYGQVFSPQAGSHEHVINNMSK------DTAKHTLSMKLNSFHSLIQQTLNDKN------- 432
            ...|:.|......|..|...:...::      |::..:.|....:....|..::|.||       
  Fly   288 GGGRSSGTSVITSADHHMTTVPTPAQSLEGSCDSSSPSPSSTSGAAILPISVSVNRKNGANVPLG 352

Zfish   433 PDTNRPYCKELLEEAAKKFR 452
            .|....||::|||    |||
  Fly   353 QDVFLDYCQKLLE----KFR 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt2aNP_571027.1 DM 57..103 CDD:279137 27/45 (60%)
dsxNP_001262353.1 DM 41..86 CDD:279137 27/44 (61%)
DSX_dimer 353..404 CDD:285978 9/20 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383821at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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