DRSC/TRiP Functional Genomics Resources

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Protein Alignment wnt1 and Wnt6

DIOPT Version :9

Sequence 1:XP_005162280.1 Gene:wnt1 / 30128 ZFINID:ZDB-GENE-980526-526 Length:375 Species:Danio rerio
Sequence 2:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster


Alignment Length:460 Identity:153/460 - (33%)
Similarity:215/460 - (46%) Gaps:130/460 - (28%)


- Green bases have known domain annotations that are detailed below.


Zfish     6 MRVLALLLAVKAACVLLVSSLTGTGAVNNSGRWWGIVNVASSGNLLTNSKNVQLVLDPSL-ALLS 69
            ||:|.::     |.::....:||.|        |              ::...::|||:| ...:
  Fly     1 MRLLMVI-----AILIFAMPMTGFG--------W--------------AEGTNILLDPNLMCKKT 38

Zfish    70 RRQR----KLIRQNPGIL-HAIAAGLHTAIKECKWQFRNRRWNCPTTHSPNVFGKIVNRGCRETA 129
            ||.|    ::.|.:..:| ..|..|::...:||::|||||||||......  ..||:.|..|||.
  Fly    39 RRLRGKLAEICRHDSALLKEIIINGINLGFRECEFQFRNRRWNCTVLRKS--MRKILMRDSRETG 101

Zfish   130 FVFAITSAGVTHAVARSCSEGAIESCTCDY----------------------------------- 159
            ||.|||:||||:||.::|:.|.:..|:||.                                   
  Fly   102 FVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQQAAMLRQQM 166

Zfish   160 -------------------------------RRRGPGG-------------PD--WHWGGCSDNV 178
                                           |.|.|||             |:  |.||||||||
  Fly   167 PLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQWEWGGCSDNV 231

Zfish   179 EFGRMFGREFVDSSERGR--DLRYLTNLHNNEAGRMTVASEMQQECKCHGMSGSCTVRTCWMRLP 241
            .||....|.|:|:.:|.|  ||..|...|||.|||:.:...|:.||||||:||||||:|||:::|
  Fly   232 NFGLRHSRVFLDAKQRQRRSDLGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMP 296

Zfish   242 SFRLVGDYLKDRFDGASRVVYANKGSNRASHRADPRHLEPENPAHKLPSSR-DLVYFEKSPNFCS 305
            .||.|...|:||:|.|.:|...|.|::          ..||:| |..|::: .||:.:.||:||:
  Fly   297 PFREVAGRLRDRYDSARKVTLRNDGNS----------FMPESP-HARPANKYQLVFADDSPDFCT 350

Zfish   306 YNGKTGTHGTSGRTCNSSSPALDGCELLCCGRGYKTRMEQVTERCHCTFHWCCHVSCLNCTSTQT 370
            .|.|||..||.||.||.:|...|.|:.|||.||:..|:.:....|.|.|.|||.|:|..|...:.
  Fly   351 PNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFKWCCEVTCEKCLEHRA 415

Zfish   371 VHQCL 375
            |:.||
  Fly   416 VNTCL 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wnt1XP_005162280.1 WNT1 64..375 CDD:128408 140/400 (35%)
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 137/390 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D280593at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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