DRSC/TRiP Functional Genomics Resources

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Protein Alignment wnt5b and Wnt6

DIOPT Version :9

Sequence 1:XP_017210434.1 Gene:wnt5b / 30105 ZFINID:ZDB-GENE-980526-87 Length:380 Species:Danio rerio
Sequence 2:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster


Alignment Length:435 Identity:131/435 - (30%)
Similarity:199/435 - (45%) Gaps:118/435 - (27%)


- Green bases have known domain annotations that are detailed below.


Zfish    27 LLLAVTLIVCNSQLLVVANSWWSLAMNPIQRPEMYIIGAQPLCSQLTGLSQGQRKLCQ----LYQ 87
            ||:.:.:::.   .:.:....|:...|.:..|.:       :|.:...|.....::|:    |.:
  Fly     3 LLMVIAILIF---AMPMTGFGWAEGTNILLDPNL-------MCKKTRRLRGKLAEICRHDSALLK 57

Zfish    88 DHMVYIGEGAKTGIKECQYQFRQRRWNCSTVDNTSVFGRVMHIGSRETAFTYAVSAAGVVNAVSR 152
            :.::   .|...|.:||::|||.|||||:.:..:  ..:::...||||.|..|::||||..||::
  Fly    58 EIII---NGINLGFRECEFQFRNRRWNCTVLRKS--MRKILMRDSRETGFVNAITAAGVTYAVTK 117

Zfish   153 ACREGELSTCGCSRAARPRD---------------------------------------LPR--- 175
            ||..|:|..|.|.:|...|:                                       |.|   
  Fly   118 ACTMGQLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQQAAMLRQQMPLQDQHPSQRLSRMNN 182

Zfish   176 --------------------------------------DWLWGGCGDNVNYGYRFAREFVDARER 202
                                                  .|.||||.||||:|.|.:|.|:||::|
  Fly   183 ASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQR 247

Zfish   203 EKNYPRGSVEHARTLMNLQNNEAGRMAVYNLANVACKCHGVSGSCSLKTCWLQLADFRRVGEFLK 267
            ::....|      ||:...||.|||:|:.:...:.|||||:||||::|||||::..||.|...|:
  Fly   248 QRRSDLG------TLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLR 306

Zfish   268 EKYDSAAAMRINRRGKLELVNNRFNP------PTGE-DLVYIDPSPDYCLRNETTGSLGTQGRLC 325
            ::||||..:.:...|      |.|.|      |..: .||:.|.|||:|..|..||:||||||.|
  Fly   307 DRYDSARKVTLRNDG------NSFMPESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGREC 365

Zfish   326 NKTSEGMDGCELMCCGRGYDQFKTYKHERCHCKFHWCCYVKCKRC 370
            |.||.|.|.|:.:||.||:.:....:...|.|.|.|||.|.|::|
  Fly   366 NVTSSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFKWCCEVTCEKC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wnt5bXP_017210434.1 None
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 125/387 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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