DRSC/TRiP Functional Genomics Resources

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Protein Alignment wnt5b and Wnt5

DIOPT Version :9

Sequence 1:XP_017210434.1 Gene:wnt5b / 30105 ZFINID:ZDB-GENE-980526-87 Length:380 Species:Danio rerio
Sequence 2:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster


Alignment Length:457 Identity:155/457 - (33%)
Similarity:222/457 - (48%) Gaps:145/457 - (31%)


- Green bases have known domain annotations that are detailed below.


Zfish    69 CSQLTGLSQGQRKLCQLYQDHMVYIGEGAKTGIKECQYQFRQRRWNCSTVDNTSVFGRVMHIGSR 133
            |....|||..|:|.|..:...|..|..||:..|:|||:||:.|||||||.::.:|||.:..:.:.
  Fly   548 CYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDETVFGPMTSLAAP 612

Zfish   134 ETAFTYAVSAAGVVNAVSRACREGELSTCGCSRAARPRDLPRDWLWGGCGDNVNYGYRFAREFVD 198
            |.||.:|::||.|.:.::||||:|:|::|.|||.:||:.|..||.|||||||:.:.|:||.:|:|
  Fly   613 EMAFIHALAAATVTSFIARACRDGQLASCSCSRGSRPKQLHDDWKWGGCGDNLEFAYKFATDFID 677

Zfish   199 AREREKN---------------------------------------------------------- 205
            :||:|.|                                                          
  Fly   678 SREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTEAENS 742

Zfish   206 ----------------------------------------------------------------- 205
                                                                             
  Fly   743 HILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKKKRKNQRA 807

Zfish   206 ------YPRGSVEH----------------ARTLMNLQNNEAGRMAVYNLANVACKCHGVSGSCS 248
                  |||..::.                ||:||||.||||||.||...|.:.|||||||||||
  Fly   808 AADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITCKCHGVSGSCS 872

Zfish   249 LKTCWLQLADFRRVGEFLKEKYDSAAAMRINRRGKLELVNNRFNPPTGEDLVYIDPSPDYCLRNE 313
            |.|||.||:..|.:|::|:|||:.|..::||:||:|::.:.:|..||..||:|:|.|||:|..:.
  Fly   873 LITCWQQLSSIREIGDYLREKYEGATKVKINKRGRLQIKDLQFKVPTAHDLIYLDESPDWCRNSY 937

Zfish   314 TTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDQFKTYKHERCHCKFHWCCYVKCKRCTSLVDQFV 378
            .....||.||:|:|.|.|::.|.::||||||:......:|||:|||||||.|||:.||.::::..
  Fly   938 ALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVNERCNCKFHWCCQVKCEVCTKVLEEHT 1002

Zfish   379 CK 380
            ||
  Fly  1003 CK 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wnt5bXP_017210434.1 None
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 151/449 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586773
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003382
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12027
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2901
SonicParanoid 1 1.000 - - X108
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 1 1.500 - -
88.470

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