DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment elk4 and pnt

DIOPT Version :9

Sequence 1:NP_571005.2 Gene:elk4 / 30093 ZFINID:ZDB-GENE-030716-1 Length:443 Species:Danio rerio
Sequence 2:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster


Alignment Length:81 Identity:52/81 - (64%)
Similarity:61/81 - (75%) Gaps:0/81 - (0%)


- Green bases have known domain annotations that are detailed below.


Zfish     5 VTLWQFLLQLLLDPGNEQLICWTNEDGEFKLLQAEEVARLWGARKNKPSMNYDKLSRALRYYYDK 69
            :.||||||:||||...:..|.||.:..||||...:||||.||.|||||.|||:||||.|||||||
  Fly   610 IQLWQFLLELLLDKTCQSFISWTGDGWEFKLTDPDEVARRWGIRKNKPKMNYEKLSRGLRYYYDK 674

Zfish    70 NIIKKVNGQKFVYRFV 85
            |||.|..|:::|||||
  Fly   675 NIIHKTAGKRYVYRFV 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elk4NP_571005.2 ETS 17..89 CDD:197710 43/69 (62%)
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879
ETS 609..693 CDD:197710 52/81 (64%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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