Sequence 1: | NP_570994.1 | Gene: | vdra / 30076 | ZFINID: | ZDB-GENE-000210-31 | Length: | 453 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524493.1 | Gene: | Hr96 / 42993 | FlyBaseID: | FBgn0015240 | Length: | 723 | Species: | Drosophila melanogaster |
Alignment Length: | 742 | Identity: | 147/742 - (19%) |
---|---|---|---|
Similarity: | 222/742 - (29%) | Gaps: | 373/742 - (50%) |
- Green bases have known domain annotations that are detailed below.
Zfish 53 PPICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGNCTITKDNRRHCQACRLKRCI 117
Zfish 118 DIGMMKEFILTDE---------EVQRKKDLIMKR----------KEEE----------------- 146
Zfish 147 -----------------AAREARKPRLS-------------------DEQMQIINSLVEAHHKTY 175
Zfish 176 D--------------------------------------------------------------DS 178
Zfish 179 YSDFVRF-----------------------------------------------RPPVREGPVTR 196
Zfish 197 SASRAASLHSL-------------SDASSDSFNHSP----------------------------- 219
Zfish 220 -------------------ESV------------------------------------------- 222
Zfish 223 -----------------DTKLNFS-----------------------NLLMMYQDSGSPDSSEED 247
Zfish 248 QQSRLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDM 312
Zfish 313 SWSCGGPDFKYCINDVTKAGHTLE----LLEPLVKFQVGL-------------KKLKLHEEEHVL 360
Zfish 361 LMAICLLSPDRPGV--QDHVRIEALQDRLCDVLQAYIRIQHPG--GRLLYAKMIQKLADLRSLNE 421
Zfish 422 EHSKQYRSLSFQPEHSMQLTPLVLEVF 448 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vdra | NP_570994.1 | NR_DBD_VDR | 48..154 | CDD:143513 | 54/153 (35%) |
Hinge | 129..158 | 9/100 (9%) | |||
NR_LBD_VDR | 156..452 | CDD:132731 | 92/586 (16%) | ||
Vitamin D3 binding | 255..265 | 3/9 (33%) | |||
Interaction with coactivator LXXLL motif | 274..292 | 10/17 (59%) | |||
Vitamin D3 binding | 299..306 | 2/6 (33%) | |||
9aaTAD. /evidence=ECO:0000250|UniProtKB:P11473 | 442..450 | 4/7 (57%) | |||
Hr96 | NP_524493.1 | NR_DBD_CAR | 5..98 | CDD:143524 | 49/92 (53%) |
NR_LBD | 462..>573 | CDD:299703 | 28/115 (24%) | ||
NR_LBD_F1 | 523..702 | CDD:132727 | 52/200 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 103 | 1.000 | Domainoid score | I6716 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 171 | 1.000 | Inparanoid score | I4089 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D153746at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24082 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R6384 |
SonicParanoid | 1 | 1.000 | - | - | X988 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.100 |